Gfo_R015246 (Geospiza fortis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Gfo_R015246 T047361_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYCN
M04128_2.00 		Homo sapiens
NVCACGTGNN
NNCACGTGBN		 SELEX
Yin et al.(2017)
MYCN_eDBD_HT-SELEX 		0.886 0.981
MYCN
M08053_2.00 		Homo sapiens
NNCCACGTGGNN
NNCCACGTGGNN		 ChIP-seq
Mathelier et al.(2014)
MA0104.4 		0.886 0.981
MYCN
M08727_2.00 		Homo sapiens
BHSCACGTGBYB
VRVCACGTGSDV		 Misc
Kulakovskiy et al.(2013)
MYCN_HUMAN.H11MO.0.A 		0.886 0.981
MYCN
M09846_2.00 		Homo sapiens
NNVCACGTGNHN
NDNCACGTGBNN		 Transfac
Matys et al.(2006)
V$NMYC_01 		0.886 0.981
MYCN
M09847_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NMYC_02 		0.886 0.981
MYCN
M09848_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NMYC_Q3 		0.886 0.981
Mycn
M08768_2.00 		Mus musculus
MCACGYGV
BCRCGTGK		 Misc
Kulakovskiy et al.(2013)
MYCN_MOUSE.H11MO.0.A 		0.886 0.962
Mycn
M09476_2.00 		Mus musculus
SCACGTGSNN
NNSCACGTGS		 Misc
Heinz et al.(2010)
mES-nMyc_GSE11431 		0.886 0.962
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R015246 bHLH 300 352

Links

Other bHLH family TFs
Other Geospiza fortis TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000001062 Ailuropoda melanoleuca ENSAMEG00000001062 I 0.886
Alligator_sinensis_CCG003524.1 Alligator sinensis Alligator_sinensis_CCG003524.1 I 0.886
ENSAPLG00000009825 Anas platyrhynchos ENSAPLG00000009825 I 0.886
MYCN Anolis carolinensis ENSACAG00000011351 I 0.886
Afo_R015728 Aptenodytes forsteri Afo_R015728 I 0.886
ENSP00000281043-D1 Bos grunniens ENSP00000281043-D1 I 0.886
ENSBTAG00000023372 Bos taurus ENSBTAG00000023372 I 0.886
Brh_R011889 Buceros rhinoceros Brh_R011889 I 0.914
Aan_R015370 Calypte anna Aan_R015370 I 0.886
ENSCAFG00000003715 Canis familiaris ENSCAFG00000003715 I 0.886
MYCN Cavia porcellus ENSCPOG00000020263 I 0.886
Cmyd_10010643 Chelonia mydas Cmyd_10010643 I 0.886
ENSCSAG00000007889 Chlorocebus sabaeus ENSCSAG00000007889 I 0.886
MYCN Dasypus novemcinctus ENSDNOG00000047342 I 0.874
ENSETEG00000007657 Echinops telfairi ENSETEG00000007657 I 0.886
ENSECAG00000002896 Equus caballus ENSECAG00000002896 I 0.886
ENSFCAG00000022893 Felis catus ENSFCAG00000022893 I 0.886
ENSFALG00000008694 Ficedula albicollis ENSFALG00000008694 I 0.914
MYCN Gallus gallus ENSGALG00000016462 I 0.886
MYCN Gorilla gorilla ENSGGOG00000005130 I 0.886
MYCN Homo sapiens ENSG00000134323 D 0.886
ENSSTOG00000012252 Ictidomys tridecemlineatus ENSSTOG00000012252 I 0.886
ENSSTOG00000021587 Ictidomys tridecemlineatus ENSSTOG00000021587 I 0.875
MYCN Loxodonta africana ENSLAFG00000015181 I 0.886
ENSMMUP00000024750 Macaca fascicularis ENSMMUP00000024750 I 0.886
ENSMMUG00000018805 Macaca mulatta ENSMMUG00000018805 I 0.886
ENSMEUG00000006154 Macropus eugenii ENSMEUG00000006154 I 0.886
ENSMGAG00000015965 Meleagris gallopavo ENSMGAG00000015965 I 0.886
MYCN Microcebus murinus ENSMICG00000013903 I 0.886
ENSMPUG00000013620 Mustela putorius furo ENSMPUG00000013620 I 0.886
Mycn Mus musculus ENSMUSG00000037169 D 0.886
Myotis_brandtii_MYCN_10020172 Myotis brandtii Myotis_brandtii_MYCN_10020172 I 0.886
ENSMLUG00000026821 Myotis lucifugus ENSMLUG00000026821 I 0.886
ENSNLEG00000014496 Nomascus leucogenys ENSNLEG00000014496 I 0.886
MYCN Ochotona princeps ENSOPRG00000004369 I 0.886
Ogr12112 Ophisaurus gracilis Ogr12112 I 0.862
MYCN Ornithorhynchus anatinus ENSOANG00000012832 I 0.886
ENSOCUG00000026053 Oryctolagus cuniculus ENSOCUG00000026053 I 0.886
MYCN Otolemur garnettii ENSOGAG00000010927 I 0.839
ENSOARG00000016462 Ovis aries ENSOARG00000016462 I 0.886
MYCN Pan troglodytes ENSPTRG00000011672 I 0.886
ENSPANG00000019058 Papio anubis ENSPANG00000019058 I 0.886
ENSPSIG00000012289 Pelodiscus sinensis ENSPSIG00000012289 I 0.886
Pvit_07093 Pogona vitticeps Pvit_07093 I 0.886
ENSPPYG00000012635 Pongo abelii ENSPPYG00000012635 I 0.886
MYCN Pteropus vampyrus ENSPVAG00000010355 I 0.886
Mycn Rattus norvegicus ENSRNOG00000051372 I 0.886
MYCN Sus scrofa ENSSSCG00000008618 I 0.886
MYCN Taeniopygia guttata ENSTGUG00000013104 I 0.914
Tal_R000146 Tyto alba Tal_R000146 I 0.886
ENSVPAG00000007723 Vicugna pacos ENSVPAG00000007723 I 0.886