Ogr02020 (Ophisaurus gracilis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Ogr02020 T047491_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf4
M01750_2.00 		Mus musculus
VCAGVTGBN
NVCABCTGB		 PBM
Weirauch et al.(2014)
pTH5101 		0.914 1.000
TCF4
M02807_2.00 		Homo sapiens
HRCACCTGBN
NVCAGGTGYD		 SELEX
Jolma et al.(2013)
TCF4_1 		0.914 1.000
TCF4
M02808_2.00 		Homo sapiens
NVCACCTBBN
NVVAGGTGBN		 SELEX
Jolma et al.(2013)
TCF4_2 		0.914 1.000
TCF4
M02728_2.00 		Homo sapiens
RCACCTG
CAGGTGY		 SELEX
Jolma et al.(2010)
TCF4_dimer 		0.914 1.000
TCF4
M04214_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX 		0.914 1.000
Tcf4
M08775_2.00 		Mus musculus
HRCACCTGB
VCAGGTGYD		 Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B 		0.914 1.000
TCF4
M09461_2.00 		Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST		 Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054 		0.914 1.000
TCF4
M04215_2.00 		Homo sapiens
VCACCTGN
NCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX 		0.914 1.000
Tcf12
M01740_2.00 		Mus musculus
NVCAYCTGB
VCAGRTGBN		 PBM
Weirauch et al.(2014)
pTH5071 		0.912 0.962
TCF12
M04137_2.00 		Homo sapiens
VCACSTGB
VCASGTGB		 SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX 		0.912 0.962
Tcf12
M08062_2.00 		Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0521.1 		0.912 0.962
TCF12
M07805_2.00 		Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha 		0.912 0.962
TCF12
M07806_2.00 		Homo sapiens
VCASCTGB
VCAGSTGB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha 		0.912 0.962
TCF12
M08731_2.00 		Homo sapiens
CMCASCTGSH
DSCAGSTGKG		 Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A 		0.912 0.962
Tcf12
M08762_2.00 		Mus musculus
VMCASCTGSH
DSCAGSTGKB		 Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A 		0.912 0.962
TCF12
M09458_2.00 		Homo sapiens
NNVCAGCTGB
VCAGCTGBNN		 Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465 		0.912 0.962
TCF12
M09858_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HEB_Q6 		0.912 0.962
TCF12
M09859_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HTF4_Q2 		0.912 0.962
TCF12
M09860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_01 		0.912 0.962
TCF12
M09861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_03 		0.912 0.962
TCF12
M09862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_05 		0.912 0.962
TCF12
M04138_2.00 		Homo sapiens
NCAYCTGN
NCAGRTGN		 SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX 		0.912 0.962
Tcf3
M00753_2.00 		Mus musculus
VCACCTGBN
NVCAGGTGB		 PBM
Weirauch et al.(2013)
pTH3866 		0.912 0.885
Tcf3
M01723_2.00 		Mus musculus
NNVCACSTGB
VCASGTGBNN		 PBM
Weirauch et al.(2014)
pTH4580 		0.912 0.885
Tcf3
M00118_2.00 		Mus musculus
VCAYCTGB
VCAGRTGB		 PBM
Badis et al.(2009)
Tcfe2a_3865 		0.912 0.885
Tcf3
M09465_2.00 		Mus musculus
ABWTCAAAGS
SCTTTGAWVT		 Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724 		0.884 0.923
Tcf3
M09466_2.00 		Mus musculus
VCAGCTGBNN
NNVCAGCTGB		 Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978 		0.884 0.923
Tcf3
M09886_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E47_05 		0.884 0.923
TCF3
M02775_2.00 		Homo sapiens
NVCACCTGBN
NVCAGGTGBN		 SELEX
Jolma et al.(2013)
TCF3_1 		0.884 0.885
TCF3
M08710_2.00 		Homo sapiens
VVCASCTGCHN
NDGCAGSTGBB		 Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A 		0.884 0.885
TCF3
M09791_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E12_Q6 		0.884 0.885
TCF3
M09792_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_01 		0.884 0.885
TCF3
M09793_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_02 		0.884 0.885
TCF3
M09794_2.00 		Homo sapiens
VVVVMCACCTGCNBB
VVNGCAGGTGKBBBB		 Transfac
Matys et al.(2006)
V$E47_01 		0.884 0.885
TCF3
M09795_2.00 		Homo sapiens
NNKWRCACCTGYDNNN
NNNHRCAGGTGYWMNN		 Transfac
Matys et al.(2006)
V$E47_02 		0.884 0.885
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr02020 bHLH 523 576

Links

Other bHLH family TFs
Other Ophisaurus gracilis TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000015639 Ailuropoda melanoleuca ENSAMEG00000015639 I 0.000
Alligator_sinensis_CCG010563.1 Alligator sinensis Alligator_sinensis_CCG010563.1 I 0.000
ENSAPLG00000004883 Anas platyrhynchos ENSAPLG00000004883 I 0.000
ZBTB37 Anolis carolinensis ENSACAG00000015410 I 0.000
Afo_R008170 Aptenodytes forsteri Afo_R008170 I 0.000
ENSAMXG00000018035 Astyanax mexicanus ENSAMXG00000018035 I 0.000
ENSBTAP00000038286-D1 Bos grunniens ENSBTAP00000038286-D1 I 0.000
ZBTB37 Bos taurus ENSBTAG00000004361 I 0.000
Brh_R011085 Buceros rhinoceros Brh_R011085 I 0.000
ZBTB37 Callithrix jacchus ENSCJAG00000009215 I 0.000
Aan_R002665 Calypte anna Aan_R002665 I 0.000
ZBTB37 Canis familiaris ENSCAFG00000014502 I 0.000
ZBTB37 Cavia porcellus ENSCPOG00000004346 I 0.000
Cmyd_10016816 Chelonia mydas Cmyd_10016816 I 0.000
ENSCSAG00000011813 Chlorocebus sabaeus ENSCSAG00000011813 I 0.000
ZBTB37 Choloepus hoffmanni ENSCHOG00000007975 I 0.000
zbtb37 Danio rerio ENSDARG00000042689 I 0.000
ZBTB37 Dasypus novemcinctus ENSDNOG00000007085 I 0.000
Zbtb37 Dipodomys ordii ENSDORG00000008483 I 0.000
ZBTB37 Echinops telfairi ENSETEG00000019314 I 0.000
ZBTB37 Equus caballus ENSECAG00000013585 I 0.000
ZBTB37 Erinaceus europaeus ENSEEUG00000007899 I 0.000
ZBTB37 Felis catus ENSFCAG00000026634 I 0.000
ENSFALG00000002979 Ficedula albicollis ENSFALG00000002979 I 0.000
ENSGMOG00000013329 Gadus morhua ENSGMOG00000013329 I 0.000
ZBTB37 Gallus gallus ENSGALG00000004597 I 0.000
zbtb37 Gasterosteus aculeatus ENSGACG00000013541 I 0.000
Gfo_R006654 Geospiza fortis Gfo_R006654 I 0.000
ZBTB37 Gorilla gorilla ENSGGOG00000000324 I 0.000
ZBTB37 Homo sapiens ENSG00000185278 D 0.000
ENSSTOG00000022488 Ictidomys tridecemlineatus ENSSTOG00000022488 I 0.000
ENSLACG00000016612 Latimeria chalumnae ENSLACG00000016612 I 0.000
ENSLOCG00000000232 Lepisosteus oculatus ENSLOCG00000000232 I 0.000
ZBTB37 Loxodonta africana ENSLAFG00000004363 I 0.000
ENSP00000415293 Macaca fascicularis ENSP00000415293 I 0.000
ZBTB37 Macaca mulatta ENSMMUG00000022801 I 0.000
ENSMEUG00000007312 Macropus eugenii ENSMEUG00000007312 I 0.000
ZBTB37 Meleagris gallopavo ENSMGAG00000001976 I 0.000
ZBTB37 Microcebus murinus ENSMICG00000002978 I 0.000
ZBTB37 Monodelphis domestica ENSMODG00000004228 I 0.000
ENSMPUG00000004728 Mustela putorius furo ENSMPUG00000004728 I 0.000
Zbtb37 Mus musculus ENSMUSG00000043467 I 0.000
Myotis_brandtii_ZBTB37_10032059 Myotis brandtii Myotis_brandtii_ZBTB37_10032059 I 0.000
ZBTB37 Myotis lucifugus ENSMLUG00000011082 I 0.000
ENSNLEG00000015319 Nomascus leucogenys ENSNLEG00000015319 I 0.000
ZBTB37 Ochotona princeps ENSOPRG00000013039 I 0.000
Ogr05757 Ophisaurus gracilis Ogr05757 I 0.000
ENSONIG00000007779 Oreochromis niloticus ENSONIG00000007779 I 0.000
ZBTB37 Ornithorhynchus anatinus ENSOANG00000000922 I 0.000
ZBTB37 Oryctolagus cuniculus ENSOCUG00000017475 I 0.000
zbtb37 Oryzias latipes ENSORLG00000014087 I 0.000
ZBTB37 Otolemur garnettii ENSOGAG00000027115 I 0.000
ENSOARG00000012816 Ovis aries ENSOARG00000012816 I 0.000
ZBTB37 Pan troglodytes ENSPTRG00000001700 I 0.000
ENSPANG00000002385 Papio anubis ENSPANG00000002385 I 0.000
ENSPSIG00000016668 Pelodiscus sinensis ENSPSIG00000016668 I 0.000
ENSPFOG00000005554 Poecilia formosa ENSPFOG00000005554 I 0.000
Pvit_13430 Pogona vitticeps Pvit_13430 I 0.000
ENSPPYG00000000492 Pongo abelii ENSPPYG00000000492 I 0.000
Zbtb37 Rattus norvegicus ENSRNOG00000026907 I 0.000
ENSSHAG00000006755 Sarcophilus harrisii ENSSHAG00000006755 I 0.000
ZBTB37 Sus scrofa ENSSSCG00000015494 I 0.000
ZBTB37 Taeniopygia guttata ENSTGUG00000018373 I 0.000
zbtb37 Takifugu rubripes ENSTRUG00000010776 I 0.000
ENSTSYG00000009926 Tarsius syrichta ENSTSYG00000009926 I 0.000
zbtb37 Tetraodon nigroviridis ENSTNIG00000000126 I 0.000
ZBTB37 Tupaia belangeri ENSTBEG00000004052 I 0.000
ZBTB37 Tursiops truncatus ENSTTRG00000008564 I 0.000
ZBTB37 Vicugna pacos ENSVPAG00000002589 I 0.000
zbtb37 Xenopus tropicalis XB-GENE-979959 I 0.000
ENSXMAG00000005565 Xiphophorus maculatus ENSXMAG00000005565 I 0.000