Pvit_17395 (Pogona vitticeps)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pvit_17395 T047766_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf12
M01740_2.00 		Mus musculus
NVCAYCTGB
VCAGRTGBN		 PBM
Weirauch et al.(2014)
pTH5071 		0.914 1.000
TCF12
M04137_2.00 		Homo sapiens
VCACSTGB
VCASGTGB		 SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX 		0.914 1.000
Tcf12
M08062_2.00 		Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0521.1 		0.914 1.000
TCF12
M07805_2.00 		Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha 		0.914 1.000
TCF12
M07806_2.00 		Homo sapiens
VCASCTGB
VCAGSTGB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha 		0.914 1.000
TCF12
M08731_2.00 		Homo sapiens
CMCASCTGSH
DSCAGSTGKG		 Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A 		0.914 1.000
Tcf12
M08762_2.00 		Mus musculus
VMCASCTGSH
DSCAGSTGKB		 Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A 		0.914 1.000
TCF12
M09458_2.00 		Homo sapiens
NNVCAGCTGB
VCAGCTGBNN		 Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465 		0.914 1.000
TCF12
M09858_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HEB_Q6 		0.914 1.000
TCF12
M09859_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HTF4_Q2 		0.914 1.000
TCF12
M09860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_01 		0.914 1.000
TCF12
M09861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_03 		0.914 1.000
TCF12
M09862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_05 		0.914 1.000
TCF12
M04138_2.00 		Homo sapiens
NCAYCTGN
NCAGRTGN		 SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX 		0.914 1.000
Tcf3
M00753_2.00 		Mus musculus
VCACCTGBN
NVCAGGTGB		 PBM
Weirauch et al.(2013)
pTH3866 		0.914 0.885
Tcf3
M01723_2.00 		Mus musculus
NNVCACSTGB
VCASGTGBNN		 PBM
Weirauch et al.(2014)
pTH4580 		0.914 0.885
Tcf3
M00118_2.00 		Mus musculus
VCAYCTGB
VCAGRTGB		 PBM
Badis et al.(2009)
Tcfe2a_3865 		0.914 0.885
Tcf4
M01750_2.00 		Mus musculus
VCAGVTGBN
NVCABCTGB		 PBM
Weirauch et al.(2014)
pTH5101 		0.912 0.962
TCF4
M02807_2.00 		Homo sapiens
HRCACCTGBN
NVCAGGTGYD		 SELEX
Jolma et al.(2013)
TCF4_1 		0.912 0.962
TCF4
M02808_2.00 		Homo sapiens
NVCACCTBBN
NVVAGGTGBN		 SELEX
Jolma et al.(2013)
TCF4_2 		0.912 0.962
TCF4
M02728_2.00 		Homo sapiens
RCACCTG
CAGGTGY		 SELEX
Jolma et al.(2010)
TCF4_dimer 		0.912 0.962
TCF4
M04214_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX 		0.912 0.962
Tcf4
M08775_2.00 		Mus musculus
HRCACCTGB
VCAGGTGYD		 Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B 		0.912 0.962
TCF4
M09461_2.00 		Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST		 Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054 		0.912 0.962
TCF4
M04215_2.00 		Homo sapiens
VCACCTGN
NCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX 		0.912 0.962
Tcf3
M09465_2.00 		Mus musculus
ABWTCAAAGS
SCTTTGAWVT		 Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724 		0.886 0.962
Tcf3
M09466_2.00 		Mus musculus
VCAGCTGBNN
NNVCAGCTGB		 Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978 		0.886 0.962
Tcf3
M09886_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E47_05 		0.886 0.962
TCF3
M02775_2.00 		Homo sapiens
NVCACCTGBN
NVCAGGTGBN		 SELEX
Jolma et al.(2013)
TCF3_1 		0.886 0.923
TCF3
M08710_2.00 		Homo sapiens
VVCASCTGCHN
NDGCAGSTGBB		 Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A 		0.886 0.923
TCF3
M09791_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E12_Q6 		0.886 0.923
TCF3
M09792_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_01 		0.886 0.923
TCF3
M09793_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_02 		0.886 0.923
TCF3
M09794_2.00 		Homo sapiens
VVVVMCACCTGCNBB
VVNGCAGGTGKBBBB		 Transfac
Matys et al.(2006)
V$E47_01 		0.886 0.923
TCF3
M09795_2.00 		Homo sapiens
NNKWRCACCTGYDNNN
NNNHRCAGGTGYWMNN		 Transfac
Matys et al.(2006)
V$E47_02 		0.886 0.923
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_17395 bHLH 562 615

Links

Other bHLH family TFs
Other Pogona vitticeps TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000018716 Ailuropoda melanoleuca ENSAMEG00000018716 N
Alligator_sinensis_CCG000862.1 Alligator sinensis Alligator_sinensis_CCG000862.1 N
ENSAPLG00000000714 Anas platyrhynchos ENSAPLG00000000714 N
Afo_R000495 Aptenodytes forsteri Afo_R000495 N
ENSAMXG00000020327 Astyanax mexicanus ENSAMXG00000020327 N
ACEP14936 Atta cephalotes ACEP14936 N
ACEP21807 Atta cephalotes ACEP21807 N
ENSP00000348460-D1 Bos grunniens ENSP00000348460-D1 N
NPAS1 Bos taurus ENSBTAG00000015576 N
Brh_R013374 Buceros rhinoceros Brh_R013374 N
NPAS3 Callithrix jacchus ENSCJAG00000005437 N
NPAS1 Callithrix jacchus ENSCJAG00000011666 N
Aan_R007988 Calypte anna Aan_R007988 N
Cflo_02462--XP_391937.2_APIME Camponotus floridanus Cflo_02462--XP_391937.2_APIME N
NPAS1 Canis familiaris ENSCAFG00000032405 N
NPAS3 Cavia porcellus ENSCPOG00000006976 N
NPAS1 Cavia porcellus ENSCPOG00000023069 N
Cmyd_10005570 Chelonia mydas Cmyd_10005570 N
ENSCSAG00000003006 Chlorocebus sabaeus ENSCSAG00000003006 N
NPAS3 Choloepus hoffmanni ENSCHOG00000013756 N
CpipJ_CPIJ006378 Culex pipiens CpipJ_CPIJ006378 N
CPIJ006378 Culex quinquefasciatus CPIJ006378 N
npas1 Danio rerio ENSDARG00000015876 N
NPAS1 Dasypus novemcinctus ENSDNOG00000035321 N
Npas3 Dipodomys ordii ENSDORG00000000860 N
NPAS3 Echinops telfairi ENSETEG00000016603 N
ENSECAG00000004630 Equus caballus ENSECAG00000004630 N
NPAS3 Erinaceus europaeus ENSEEUG00000006528 N
NPAS1 Felis catus ENSFCAG00000004833 N
ENSGMOG00000016149 Gadus morhua ENSGMOG00000016149 N
NPAS3 Gallus gallus ENSGALG00000029022 N
npas1 Gasterosteus aculeatus ENSGACG00000009494 N
Gfo_R012966 Geospiza fortis Gfo_R012966 N
NPAS1 Gorilla gorilla ENSGGOG00000013398 N
NPAS3 Gorilla gorilla ENSGGOG00000022941 N
Hsal_10736--XP_391937.2_APIME Harpegnathos saltator Hsal_10736--XP_391937.2_APIME N
HelroG63031 Helobdella robusta HelroG63031 N
NPAS1 Homo sapiens ENSG00000130751 N
NPAS3 Homo sapiens ENSG00000151322 N
ENSSTOG00000003396 Ictidomys tridecemlineatus ENSSTOG00000003396 N
ENSSTOG00000014736 Ictidomys tridecemlineatus ENSSTOG00000014736 N
ENSLACG00000001145 Latimeria chalumnae ENSLACG00000001145 N
ENSLOCG00000009512 Lepisosteus oculatus ENSLOCG00000009512 N
ENSLOCG00000014899 Lepisosteus oculatus ENSLOCG00000014899 N
LDEC011477 Leptinotarsa decemlineata LDEC011477 N
NPAS3 Loxodonta africana ENSLAFG00000007169 N
LCUP010821 Lucilia cuprina LCUP010821 N
ENSP00000348460 Macaca fascicularis ENSP00000348460 N
ENSP00000405290 Macaca fascicularis ENSP00000405290 N
NPAS1 Macaca mulatta ENSMMUG00000011330 N
NPAS3 Macaca mulatta ENSMMUG00000014839 N
ENSMEUG00000000606 Macropus eugenii ENSMEUG00000000606 N
ENSMEUG00000012966 Macropus eugenii ENSMEUG00000012966 N
ENSMGAG00000016559 Meleagris gallopavo ENSMGAG00000016559 N
NPAS1 Microcebus murinus ENSMICG00000006346 N
NPAS1 Monodelphis domestica ENSMODG00000009053 N
ENSMODG00000024103 Monodelphis domestica ENSMODG00000024103 N
MDOA009035 Musca domestica MDOA009035 N
ENSMPUG00000001046 Mustela putorius furo ENSMPUG00000001046 N
ENSMPUG00000005118 Mustela putorius furo ENSMPUG00000005118 N
Npas1 Mus musculus ENSMUSG00000001988 N
Npas3 Mus musculus ENSMUSG00000021010 N
NV13641 Nasonia vitripennis NV13641 N
NEMVEDRAFT_v1g96877 Nematostella vectensis NEMVEDRAFT_v1g96877 N
ENSNLEG00000002946 Nomascus leucogenys ENSNLEG00000002946 N
ENSNLEG00000003239 Nomascus leucogenys ENSNLEG00000003239 N
NPAS3 Ochotona princeps ENSOPRG00000008184 N
NPAS1 Ochotona princeps ENSOPRG00000014860 N
ENSOANG00000014043 Ornithorhynchus anatinus ENSOANG00000014043 N
ENSORLG00000006931 Oryzias latipes ENSORLG00000006931 N
NPAS3 Oryzias latipes ENSORLG00000018065 N
NPAS1 Otolemur garnettii ENSOGAG00000012829 N
NPAS3 Otolemur garnettii ENSOGAG00000014886 N
ENSOARG00000010869 Ovis aries ENSOARG00000010869 N
NPAS3 Pan troglodytes ENSPTRG00000006249 N
NPAS1 Pan troglodytes ENSPTRG00000011199 N
ENSPANG00000014704 Papio anubis ENSPANG00000014704 N
PHUM613040 Pediculus humanus PHUM613040 N
ENSPSIG00000017052 Pelodiscus sinensis ENSPSIG00000017052 N
ENSPFOG00000008940 Poecilia formosa ENSPFOG00000008940 N
Pvit_04747 Pogona vitticeps Pvit_04747 N
ENSPPYG00000010165 Pongo abelii ENSPPYG00000010165 N
ENSPCAG00000000784 Procavia capensis ENSPCAG00000000784 N
NPAS3 Procavia capensis ENSPCAG00000007391 N
Npas1 Rattus norvegicus ENSRNOG00000015376 N
Sakowv30006415m.g Saccoglossus kowalevskii Sakowv30006415m.g N
ENSSHAG00000011475 Sarcophilus harrisii ENSSHAG00000011475 N
NPAS3 Sorex araneus ENSSARG00000003164 N
ENSSARG00000014127 Sorex araneus ENSSARG00000014127 N
SPU_014249 Strongylocentrotus purpuratus SPU_014249 N
NPAS1 Sus scrofa ENSSSCG00000003108 N
ENSSSCG00000024473 Sus scrofa ENSSSCG00000024473 N
ENSTGUG00000011911 Taeniopygia guttata ENSTGUG00000011911 N
npas1 Takifugu rubripes ENSTRUG00000012318 N
TC001448 Tribolium castaneum TC001448 N
NPAS3 Tupaia belangeri ENSTBEG00000016041 N
NPAS3 Tursiops truncatus ENSTTRG00000003266 N
NPAS1 Tursiops truncatus ENSTTRG00000011416 N
Tal_R006980 Tyto alba Tal_R006980 N
NPAS3 Vicugna pacos ENSVPAG00000001108 N
npas3 Xenopus tropicalis XB-GENE-999791 N
ENSXMAG00000004213 Xiphophorus maculatus ENSXMAG00000004213 N
L798_01241 Zootermopsis nevadensis L798_01241 N