cassava22865.valid.m1 (Manihot esculenta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 cassava22865.valid.m1 T048000_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BPE
M01700_2.00 		Arabidopsis thaliana
NCACGTNNN
NNNACGTGN		 PBM
Weirauch et al.(2014)
pTH7290 		0.914 1.000
BPE
M06726_2.00 		Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN		 Dap-seq
OMalley et al.(2016)
bHLH31_col 		0.914 1.000
BHLH78
M01713_2.00 		Arabidopsis thaliana
GCACGTGC
GCACGTGC		 PBM
Weirauch et al.(2014)
pTH7666 		0.901 0.882
BHLH49
M01052_2.00 		Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN		 PBM
Sullivan et al.(2014)
pTH7309 		0.875 0.863
PK06517.1
M01122_2.00 		Cannabis sativa
NCACGTGC
GCACGTGN		 PBM
Lambert et al.(2019)
pTH10104 		0.875 0.863
PK05923.1
M01121_2.00 		Cannabis sativa
NNNNNNN
NNNNNNN		 PBM
Lambert et al.(2019)
pTH11368 		0.868 0.804
gw1.270.82.1
M01758_2.00 		Physcomitrella patens
NCACGTGH
DCACGTGN		 PBM
Weirauch et al.(2014)
pTH8457 		0.862 0.843
BHLH77
M06736_2.00 		Arabidopsis thaliana
NKCACGTGVHNWHNB
VNDWNDBCACGTGMN		 Dap-seq
OMalley et al.(2016)
bHLH77_col_a 		0.862 0.843
BHLH74
M06720_2.00 		Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW
WNNNNBCACGTGNNHNHSDHS		 Dap-seq
OMalley et al.(2016)
bHLH74_col_a 		0.862 0.804
BHLH74
M06721_2.00 		Arabidopsis thaliana
CACGTGAY
RTCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a 		0.862 0.804
BEE2
M01708_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8094 		0.851 0.804
AT2G18300
M01702_2.00 		Arabidopsis thaliana
NBCACGTGCNNN
NNNGCACGTGVN		 PBM
Weirauch et al.(2014)
pTH7289 		0.851 0.784
AT2G18300
M06729_2.00 		Arabidopsis thaliana
ACTGGT
ACCAGT		 Dap-seq
OMalley et al.(2016)
bHLH64_col_a 		0.851 0.784
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava22865.valid.m1 bHLH 97 147

Links

Other bHLH family TFs
Other Manihot esculenta TFs

874 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BOTBODRAFT_358406 Botryobasidium botryosum BOTBODRAFT_358406 N 0.000
CC1G_08281 Coprinopsis cinerea CC1G_08281 I 0.000
GALMADRAFT_1170770 Galerina marginata GALMADRAFT_1170770 N 0.000
GALMADRAFT_118766 Galerina marginata GALMADRAFT_118766 I 0.000
GALMADRAFT_238545 Galerina marginata GALMADRAFT_238545 N 0.000
GALMADRAFT_439138 Galerina marginata GALMADRAFT_439138 N 0.000
GALMADRAFT_55133 Galerina marginata GALMADRAFT_55133 N 0.000
GALMADRAFT_56038 Galerina marginata GALMADRAFT_56038 N 0.000
GALMADRAFT_710225 Galerina marginata GALMADRAFT_710225 N 0.000
GALMADRAFT_924624 Galerina marginata GALMADRAFT_924624 N 0.000
GLOTRDRAFT_119791 Gloeophyllum trabeum GLOTRDRAFT_119791 I 0.000
K443DRAFT_103561 Laccaria amethystina K443DRAFT_103561 N 0.000
LACBIDRAFT_300067 Laccaria bicolor LACBIDRAFT_300067 I 0.000
MPER_08472 Moniliophthora perniciosa MPER_08472 N 0.000
Moror_15941 Moniliophthora roreri Moror_15941 N 0.000
PHACADRAFT_119777 Phanerochaete carnosa PHACADRAFT_119777 I 0.000
gww2.5.554.1 Phanerochaete chrysosporium gww2.5.554.1 N 0.000
PHLGIDRAFT_123599 Phlebiopsis gigantea PHLGIDRAFT_123599 I 0.000
PLEOSDRAFT_1087686 Pleurotus ostreatus PLEOSDRAFT_1087686 I 0.000
SCHCODRAFT_65208 Schizophyllum commune SCHCODRAFT_65208 I 0.000