estExt_fgenesh2_pg.C_3670032 (Branchiostoma floridae)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 estExt_fgenesh2_pg.C_3670032 T048405_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hes1
M01726_2.00 		Mus musculus
NVCACGYKNN
NNMRCGTGBN		 PBM
Weirauch et al.(2014)
pTH5059 		0.894 0.964
HES1
M04090_2.00 		Homo sapiens
VVCACGYGHM
KDCRCGTGBB		 SELEX
Yin et al.(2017)
HES1_eDBD_HT-SELEX 		0.894 0.964
HES1
M09822_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HES1_Q2 		0.894 0.964
HES1
M09823_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HES1_Q3 		0.894 0.964
HES1
M09824_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HES1_Q4 		0.894 0.964
HES1
M09825_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HES1_Q6 		0.894 0.964
HES1
M04091_2.00 		Homo sapiens
VNYACNYNHN
NDNRNGTRNB		 SELEX
Yin et al.(2017)
HES1_eDBD_Methyl-HT-SELEX 		0.894 0.964
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_3670032 bHLH 13 70

Links

Other bHLH family TFs
Other Branchiostoma floridae TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_061680 Acremonium chrysogenum ACRE_061680 N
BBA_00882 Beauveria bassiana BBA_00882 N
CHGG_09841 Chaetomium globosum CHGG_09841 N
CTHT_0018200 Chaetomium thermophilum CTHT_0018200 N
CPUR_07536 Claviceps purpurea CPUR_07536 N
CFIO01_11721 Colletotrichum fioriniae CFIO01_11721 N
CGGC5_10881 Colletotrichum gloeosporioides CGGC5_10881 N
GLRG_08580 Colletotrichum graminicola GLRG_08580 N
CH063_01255 Colletotrichum higginsianum CH063_01255 N
Cob_07208 Colletotrichum orbiculare Cob_07208 N
CSUB01_01314 Colletotrichum sublineola CSUB01_01314 N
UCREL1_9736 Eutypa lata UCREL1_9736 N
FFUJ_03890 Fusarium fujikuroi FFUJ_03890 N
FGRRES_04889 Fusarium graminearum FGRRES_04889 N
FOXG_05735 Fusarium oxysporum FOXG_05735 N
FPSE_03992 Fusarium pseudograminearum FPSE_03992 N
NechaG101763 Fusarium solani NechaG101763 N
FVEG_03610 Fusarium verticillioides FVEG_03610 N
GGTG_03418 Gaeumannomyces graminis GGTG_03418 N
CMQ_1562 Grosmannia clavigera CMQ_1562 N
MGG_08015 Magnaporthe oryzae MGG_08015 N
MAPG_01366 Magnaporthe poae MAPG_01366 N
MAC_06595 Metarhizium acridum MAC_06595 N
MAM_07567 Metarhizium album MAM_07567 N
MANI_002902 Metarhizium anisopliae MANI_002902 N
MBR_08628 Metarhizium brunneum MBR_08628 N
MGU_07938 Metarhizium guizhouense MGU_07938 N
MAJ_09938 Metarhizium majus MAJ_09938 N
X797_008201 Metarhizium robertsii X797_008201 N
MYCTH_71014 Myceliophthora thermophila MYCTH_71014 N
estExt_fgenesh1_pg.C_sca_43_chr10_1_00099 Nectria haematococca estExt_fgenesh1_pg.C_sca_43_chr10_1_00099 N
NCU06145 Neurospora crassa NCU06145 N
NEUTE1DRAFT_147899 Neurospora tetrasperma NEUTE1DRAFT_147899 N
F503_07557 Ophiostoma piceae uamh F503_07557 N
PFICI_13633 Pestalotiopsis fici PFICI_13633 N
SAPIO_CDS1330 Scedosporium apiospermum SAPIO_CDS1330 N
SMAC_06370 Sordaria macrospora SMAC_06370 N
SPBR_03062 Sporothrix brasiliensis SPBR_03062 N
HMPREF1624_02947 Sporothrix schenckii HMPREF1624_02947 N
S40288_02304 Stachybotrys chartarum S40288_02304 N
S40285_07530 Stachybotrys chlorohalonata S40285_07530 N
THITE_2117609 Thielavia terrestris THITE_2117609 N
UCRPA7_8290 Togninia minima UCRPA7_8290 N
VHEMI09843 Torrubiella hemipterigena VHEMI09843 N
TRIATDRAFT_297925 Trichoderma atroviride TRIATDRAFT_297925 N
TRIREDRAFT_44290 Trichoderma reesei TRIREDRAFT_44290 N
TRIVIDRAFT_71606 Trichoderma virens TRIVIDRAFT_71606 N
UV8b_6674 Ustilaginoidea virens UV8b_6674 N