estExt_gwp_gw1.C_2460032 (Physcomitrella patens)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 estExt_gwp_gw1.C_2460032 T048489_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ILR3
M01714_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH7211 		0.857 0.725
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_gwp_gw1.C_2460032 bHLH 76 126

Links

Other bHLH family TFs
Other Physcomitrella patens TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.30275s0162 Boechera stricta Bostr.30275s0162 N
BRADI3G33630 Brachypodium distachyon BRADI3G33630 N
Cagra.0812s0002 Capsella grandiflora Cagra.0812s0002 N
Carubv10004844m.g Capsella rubella Carubv10004844m.g N
Thhalv10025276m.g Eutrema salsugineum Thhalv10025276m.g N
Lus10040141.g Linum usitatissimum Lus10040141.g N
Lus10011020.g Linum usitatissimum Lus10011020.g N
Lus10000963.g Linum usitatissimum Lus10000963.g N
mgf005560m Mimulus guttatus mgf005560m N
OBART10G18780 Oryza barthii OBART10G18780 N
ORGLA10G0139200 Oryza glaberrima ORGLA10G0139200 N
OGLUM10G18860 Oryza glumaepatula OGLUM10G18860 N
BGIOSGA033455 Oryza indica BGIOSGA033455 N
OMERI08G00160 Oryza meridionalis OMERI08G00160 N
ONIVA10G21280 Oryza nivara ONIVA10G21280 N
OPUNC10G17200 Oryza punctata OPUNC10G17200 N
ORUFI10G19970 Oryza rufipogon ORUFI10G19970 N
OS10G0564200 Oryza sativa OS10G0564200 N
Pavir.Ib02309 Panicum virgatum Pavir.Ib02309 N
Solyc08g007170.1 Solanum lycopersicum Solyc08g007170.1 N
PGSC0003DMG400020508 Solanum tuberosum PGSC0003DMG400020508 N
VIT_15s0021g01220 Vitis vinifera VIT_15s0021g01220 N
VIT_07s0005g06670 Vitis vinifera VIT_07s0005g06670 N