Sakowv30011934m.g (Saccoglossus kowalevskii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Sakowv30011934m.g T048908_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEUROD1
M04148_2.00 		Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY		 SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX 		0.894 0.923
NEUROD1
M08057_2.00 		Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN		 ChIP-seq
Mathelier et al.(2014)
MA1109.1 		0.894 0.923
NEUROD1
M08735_2.00 		Homo sapiens
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A 		0.894 0.923
Neurod1
M08764_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A 		0.894 0.923
Neurod1
M09474_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298 		0.894 0.923
NEUROD1
M09873_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_01 		0.894 0.923
NEUROD1
M09874_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_02 		0.894 0.923
NEUROD1
M04149_2.00 		Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY		 SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX 		0.894 0.923
NEUROD2
M02795_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Jolma et al.(2013)
NEUROD2_1 		0.859 0.904
NEUROD2
M04160_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX 		0.859 0.904
NEUROD2
M08737_2.00 		Homo sapiens
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B 		0.859 0.904
Neurod2
M08770_2.00 		Mus musculus
RVCAGATGGB
VCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A 		0.859 0.904
NEUROD2
M04161_2.00 		Homo sapiens
RMCATATGBY
RVCATATGKY		 SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX 		0.859 0.904
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23937281_peptide bHLH 96 148
23937282_peptide bHLH 96 148

Links

Other bHLH family TFs
Other Saccoglossus kowalevskii TFs

270 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL002049 Aedes aegypti AAEL002049 N 0.000
AALB005830 Anopheles albimanus AALB005830 N 0.000
AARA005744 Anopheles arabiensis AARA005744 N 0.000
AATE014920 Anopheles atroparvus AATE014920 N 0.000
ACHR008375 Anopheles christyi ACHR008375 N 0.000
ACOM038868 Anopheles coluzzii ACOM038868 N 0.000
ACUA002672 Anopheles culicifacies ACUA002672 N 0.000
ADAC003147 Anopheles darlingi ADAC003147 N 0.000
ADIR006896 Anopheles dirus ADIR006896 N 0.000
AEPI006442 Anopheles epiroticus AEPI006442 N 0.000
AFAF013492 Anopheles farauti AFAF013492 N 0.000
AFUN004883 Anopheles funestus AFUN004883 N 0.000
CYC Anopheles gambiae AGAP005655 N 0.000
AMEC018494 Anopheles melas AMEC018494 N 0.000
AMEM006050 Anopheles merus AMEM006050 N 0.000
AMIN010178 Anopheles minimus AMIN010178 N 0.000
AQUA011207 Anopheles quadriannulatus AQUA011207 N 0.000
ASIS018029 Anopheles sinensis ASIS018029 N 0.000
ASTEI02247 Anopheles stephensi ASTEI02247 N 0.000
GB43953 Apis mellifera GB43953 N 0.000
BGIBMGA003870 Bombyx mori BGIBMGA003870 N 0.000
Cflo_03663--XP_001121441.1_APIME Camponotus floridanus Cflo_03663--XP_001121441.1_APIME N 0.000
CLEC000189 Cimex lectularius CLEC000189 N 0.000
CpipJ_CPIJ014938 Culex pipiens CpipJ_CPIJ014938 N 0.000
CPIJ014938 Culex quinquefasciatus CPIJ014938 N 0.000
KGM_21608 Danaus plexippus KGM_21608 N 0.000
DAPPUDRAFT_346995 Daphnia pulex DAPPUDRAFT_346995 N 0.000
YQE_03758 Dendroctonus ponderosae YQE_03758 N 0.000
GF10846 Drosophila ananassae FBgn0087886 N 0.000
GH16911 Drosophila grimshawi FBgn0124382 N 0.000
GL15678 Drosophila persimilis FBgn0153282 N 0.000
GA21284 Drosophila pseudoobscura FBgn0081272 N 0.000
GJ14003 Drosophila virilis FBgn0201221 N 0.000
GK17217 Drosophila willistoni FBgn0219216 N 0.000
Hsal_04208--XP_001121441.1_APIME Harpegnathos saltator Hsal_04208--XP_001121441.1_APIME N 0.000
LDEC004019 Leptinotarsa decemlineata LDEC004019 N 0.000
LCUP007672 Lucilia cuprina LCUP007672 N 0.000
MCINX006746 Melitaea cinxia MCINX006746 N 0.000
MDOA007541 Musca domestica MDOA007541 N 0.000
NV13263 Nasonia vitripennis NV13263 N 0.000
PPAI010392 Phlebotomus papatasi PPAI010392 N 0.000
RPRC000556 Rhodnius prolixus RPRC000556 N 0.000
SINV21276 Solenopsis invicta SINV21276 N 0.000
TC002494 Tribolium castaneum TC002494 N 0.000
L798_13398 Zootermopsis nevadensis L798_13398 N 0.000