Sakowv30016776m.g (Saccoglossus kowalevskii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Sakowv30016776m.g T048911_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
dimm
M03613_2.00 		Drosophila melanogaster
BDCCATATGGHV
BDCCATATGGHV		 SELEX
Nitta et al.(2015)
dimm_1 		0.874 0.865
dimm
M03614_2.00 		Drosophila melanogaster
BACCATATGGTV
BACCATATGGTV		 SELEX
Nitta et al.(2015)
dimm_2 		0.874 0.865
dimm
M05976_2.00 		Drosophila melanogaster
HCCATATGGYG
CRCCATATGGD		 B1H
Zhu et al.(2011)
dimm_da_SANGER_5_FBgn0023091 		0.874 0.865
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23940560_peptide bHLH 123 175

Links

Other bHLH family TFs
Other Saccoglossus kowalevskii TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_16881 Aegilops tauschii F775_16881 N
NAI1 Arabidopsis lyrata fgenesh2_kg.4__198__AT2G22770.1 N
NAI1 Arabidopsis thaliana AT2G22770 N
Bostr.19427s0044 Boechera stricta Bostr.19427s0044 N
Bo4g151030 Brassica oleracea Bo4g151030 I
Bo8g100870 Brassica oleracea Bo8g100870 I
Bra030207 Brassica rapa Bra030207 I
Bra039927 Brassica rapa Bra039927 I
Cagra.0882s0006 Capsella grandiflora Cagra.0882s0006 N
Ca_05320 Cicer arietinum Ca_05320 I
Thhalv10000251m.g Eutrema salsugineum Thhalv10000251m.g N
GLYMA17G16741 Glycine max GLYMA17G16741 I
GLYMA05G23291 Glycine max GLYMA05G23291 I
Gorai.012G161900 Gossypium raimondii Gorai.012G161900 I
LPERR12G15010 Leersia perrieri LPERR12G15010 N
Lus10011578.g Linum usitatissimum Lus10011578.g I
Lus10019247.g Linum usitatissimum Lus10019247.g I
MTR_4g097940 Medicago truncatula MTR_4g097940 I
Pavir.J26871 Panicum virgatum Pavir.J26871 I
Si011709m.g Setaria italica Si011709m.g I
Si024086m.g Setaria italica Si024086m.g I
GRMZM2G036554 Zea mays GRMZM2G036554 I