Sakowv30040946m.g (Saccoglossus kowalevskii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Sakowv30040946m.g T048935_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tfap4
M01717_2.00 		Mus musculus
VHCABVYGB
VCRBVTGDB		 PBM
Weirauch et al.(2014)
pTH5067 		0.880 0.885
TFAP4
M02776_2.00 		Homo sapiens
AWCAGCTGWY
RWCAGCTGWT		 SELEX
Jolma et al.(2013)
TFAP4_1 		0.880 0.885
TFAP4
M02777_2.00 		Homo sapiens
AWCAGCTGWT
AWCAGCTGWT		 SELEX
Jolma et al.(2013)
TFAP4_2 		0.880 0.885
TFAP4
M04066_2.00 		Homo sapiens
VHCAKVTGDB
VHCABMTGDB		 SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_1 		0.880 0.885
TFAP4
M04067_2.00 		Homo sapiens
VWCAGCTGWB
VWCAGCTGWB		 SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_2 		0.880 0.885
TFAP4
M04070_2.00 		Homo sapiens
RHCAYVTGDB
VHCABRTGDY		 SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_1 		0.880 0.885
TFAP4
M04071_2.00 		Homo sapiens
VHCAGCTGDB
VHCAGCTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_2 		0.880 0.885
TFAP4
M08712_2.00 		Homo sapiens
VMNCAGCTGR
YCAGCTGNKB		 Misc
Kulakovskiy et al.(2013)
TFAP4_HUMAN.H11MO.0.A 		0.880 0.885
TFAP4
M09453_2.00 		Homo sapiens
NVHCAGCTGD
HCAGCTGDBN		 Misc
Heinz et al.(2010)
AML-Tfap4_GSE45738 		0.880 0.885
TFAP4
M09802_2.00 		Homo sapiens
MNGNCHVCAGCTGDBBBW
WVVVHCAGCTGBDGNCNK		 Transfac
Matys et al.(2006)
V$AP4_01 		0.880 0.885
TFAP4
M09803_2.00 		Homo sapiens
NNSAGCTGHB
VDCAGCTSNN		 Transfac
Matys et al.(2006)
V$AP4_Q5 		0.880 0.885
TFAP4
M09804_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AP4_Q6_01 		0.880 0.885
TFAP4
M09805_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AP4_Q6_02 		0.880 0.885
TFAP4
M09806_2.00 		Homo sapiens
NVCAGCTGHB
VDCAGCTGBN		 Transfac
Matys et al.(2006)
V$AP4_Q6 		0.880 0.885
TFAP4
M04068_2.00 		Homo sapiens
DHCABMTGDN
NHCAKVTGDH		 SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_1 		0.880 0.885
TFAP4
M04069_2.00 		Homo sapiens
AWCAGCTGWT
AWCAGCTGWT		 SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_2 		0.880 0.885
TFAP4
M04072_2.00 		Homo sapiens
VHCABVTGDB
VHCABVTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_1 		0.880 0.885
TFAP4
M04073_2.00 		Homo sapiens
VHCAGCTGDB
VHCAGCTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_2 		0.880 0.885
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23922570_peptide bHLH 46 97
23922571_peptide bHLH 46 97

Links

Other bHLH family TFs
Other Saccoglossus kowalevskii TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB03935.1 Alternaria brassicicola AB03935.1 N 0.000
M437DRAFT_55860 Aureobasidium melanogenum M437DRAFT_55860 I 0.000
M438DRAFT_332335 Aureobasidium pullulans M438DRAFT_332335 N 0.000
AUEXF2481DRAFT_61161 Aureobasidium subglaciale AUEXF2481DRAFT_61161 N 0.000
BAUCODRAFT_138682 Baudoinia compniacensis BAUCODRAFT_138682 N 0.000
COCC4DRAFT_200873 Bipolaris maydis COCC4DRAFT_200873 N 0.000
COCC4DRAFT_124149 Bipolaris maydis COCC4DRAFT_124149 N 0.000
COCMIDRAFT_21935 Bipolaris oryzae COCMIDRAFT_21935 N 0.000
COCMIDRAFT_82835 Bipolaris oryzae COCMIDRAFT_82835 N 0.000
COCSADRAFT_155567 Bipolaris sorokiniana COCSADRAFT_155567 N 0.000
COCSADRAFT_40583 Bipolaris sorokiniana COCSADRAFT_40583 N 0.000
COCVIDRAFT_12967 Bipolaris victoriae COCVIDRAFT_12967 N 0.000
COCVIDRAFT_26374 Bipolaris victoriae COCVIDRAFT_26374 N 0.000
COCCADRAFT_3377 Bipolaris zeicola COCCADRAFT_3377 N 0.000
COCCADRAFT_99387 Bipolaris zeicola COCCADRAFT_99387 N 0.000
estExt_Genewise1Plus.C_20945 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_20945 N 0.000
fgenesh1_pg.C_scaffold_13000086 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_13000086 N 0.000
DOTSEDRAFT_75913 Dothistroma septosporum DOTSEDRAFT_75913 N 0.000
LEMA_P046620.1 Leptosphaeria maculans LEMA_P046620.1 N 0.000
fgenesh1_pg.C_chr_12000059 Mycosphaerella graminicola fgenesh1_pg.C_chr_12000059 N 0.000
SNOG_08725 Phaeosphaeria nodorum SNOG_08725 N 0.000
PTT_01276 Pyrenophora teres PTT_01276 N 0.000
PTT_14925 Pyrenophora teres PTT_14925 N 0.000
PTRG_04376 Pyrenophora triticirepentis PTRG_04376 N 0.000
PTRG_08828 Pyrenophora triticirepentis PTRG_08828 N 0.000
SETTUDRAFT_135369 Setosphaeria turcica SETTUDRAFT_135369 N 0.000
SETTUDRAFT_161746 Setosphaeria turcica SETTUDRAFT_161746 N 0.000
SEPMUDRAFT_152192 Sphaerulina musiva SEPMUDRAFT_152192 N 0.000
SNOG_08725 Stagonospora nodorum SNOG_08725 N 0.000
Mycgr3G96927 Zymoseptoria tritici Mycgr3G96927 N 0.000