CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10021349m.g
(
Capsella rubella
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Carubv10021349m.g
T049421_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10021349m
bHLH
59
114
KKQDHNAKERLRRMRLHASYLTLGTLLPDHSSSSSKKKWSAPSIIDNVISYIPKLQ
Links
Other
bHLH
family TFs
Other
Capsella rubella
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Al_scaffold_0002_1806
Arabidopsis lyrata
Al_scaffold_0002_1806
N
0.914
AT1G71200
Arabidopsis thaliana
AT1G71200
N
0.914
Bostr.10273s0226
Boechera stricta
Bostr.10273s0226
N
0.843
Cagra.0147s0022
Capsella grandiflora
Cagra.0147s0022
N
0.867