CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10001683m.g
(
Citrus clementina
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Ciclev10001683m.g
T049464_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10001683m
bHLH
180
228
PSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELL
Links
Other
bHLH
family TFs
Other
Citrus clementina
TFs
151 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB03118.1
Alternaria brassicicola
AB03118.1
I
0.000
ARB_05322
Arthroderma benhamiae
ARB_05322
I
0.000
MCYG_04979
Arthroderma otae
MCYG_04979
I
0.000
AGOS_AGR198C
Ashbya gossypii
AGOS_AGR198C
I
0.000
M437DRAFT_42083
Aureobasidium melanogenum
M437DRAFT_42083
I
0.000
M438DRAFT_316511
Aureobasidium pullulans
M438DRAFT_316511
I
0.000
AUEXF2481DRAFT_43803
Aureobasidium subglaciale
AUEXF2481DRAFT_43803
I
0.000
COCC4DRAFT_131332
Bipolaris maydis
COCC4DRAFT_131332
I
0.000
COCMIDRAFT_27992
Bipolaris oryzae
COCMIDRAFT_27992
I
0.000
COCSADRAFT_191180
Bipolaris sorokiniana
COCSADRAFT_191180
I
0.000
COCVIDRAFT_17132
Bipolaris victoriae
COCVIDRAFT_17132
I
0.000
COCCADRAFT_38888
Bipolaris zeicola
COCCADRAFT_38888
I
0.000
BDDG_00259
Blastomyces dermatitidis
BDDG_00259
I
0.000
PVAR5_5878
Byssochlamys spectabilis
PVAR5_5878
I
0.000
CAGL0H05621g
Candida glabrata
CAGL0H05621g
I
0.000
CORT_0E04370
Candida orthopsilosis
CORT_0E04370
I
0.000
CPAG_01728
Candida parapsilosis
CPAG_01728
I
0.000
A1O1_05243
Capronia coronata
A1O1_05243
I
0.000
A1O3_09529
Capronia epimyces
A1O3_09529
I
0.000
PV04_07501
Capronia semiimmersa
PV04_07501
I
0.000
Z519_11638
Cladophialophora bantiana
Z519_11638
I
0.000
G647_03030
Cladophialophora carrionii
G647_03030
I
0.000
PV07_11277
Cladophialophora immunda
PV07_11277
I
0.000
A1O5_02336
Cladophialophora psammophila
A1O5_02336
I
0.000
A1O7_07076
Cladophialophora yegresii
A1O7_07076
I
0.000
CIMG_07638
Coccidioides immitis
CIMG_07638
I
0.000
CPC735_043100
Coccidioides posadasii
CPC735_043100
I
0.000
estExt_fgenesh1_pm.C_30002
Cochliobolus heterostrophus C5
estExt_fgenesh1_pm.C_30002
I
0.000
W97_01089
Coniosporium apollinis
W97_01089
I
0.000
HMPREF1541_07944
Cyphellophora europaea
HMPREF1541_07944
I
0.000
H072_1342
Dactylellina haptotyla
H072_1342
N
0.000
DOTSEDRAFT_71657
Dothistroma septosporum
DOTSEDRAFT_71657
I
0.000
DRE_05946
Drechslerella stenobrocha
DRE_05946
N
0.000
EPUS_00923
Endocarpon pusillum
EPUS_00923
I
0.000
Ecym_7060
Eremothecium cymbalariae
Ecym_7060
I
0.000
A1O9_04901
Exophiala aquamarina
A1O9_04901
I
0.000
HMPREF1120_02025
Exophiala dermatitidis
HMPREF1120_02025
I
0.000
PV10_07771
Exophiala mesophila
PV10_07771
I
0.000
PV06_00786
Exophiala oligosperma
PV06_00786
I
0.000
PV11_00659
Exophiala sideris
PV11_00659
I
0.000
PV08_00691
Exophiala spinifera
PV08_00691
I
0.000
PV05_05426
Exophiala xenobiotica
PV05_05426
I
0.000
Z517_02667
Fonsecaea pedrosoi
Z517_02667
I
0.000
HCBG_00204
Histoplasma capsulatum
HCBG_00204
I
0.000
MEF2A
Homo sapiens
ENSG00000068305
D
0.000
KAFR_0E00800
Kazachstania africana
KAFR_0E00800
I
0.000
KAFR_0I00730
Kazachstania africana
KAFR_0I00730
I
0.000
KNAG_0A01830
Kazachstania naganishii
KNAG_0A01830
I
0.000
KLLA0_E24025g
Kluyveromyces lactis
KLLA0_E24025g
I
0.000
KLTH0E13156g
Kluyveromyces thermotolerans
KLTH0E13156g
I
0.000
PAS_chr4_0093
Komagataella pastoris
PAS_chr4_0093
I
0.000
SAKL0H09416g
Lachancea kluyveri
SAKL0H09416g
I
0.000
LALA0_S04e02938g
Lachancea lanzarotensis
LALA0_S04e02938g
I
0.000
KLTH0E13156g
Lachancea thermotolerans
KLTH0E13156g
I
0.000
LEMA_P028590.1
Leptosphaeria maculans
LEMA_P028590.1
I
0.000
MPH_05126
Macrophomina phaseolina
MPH_05126
I
0.000
MCYG_04979
Microsporum canis
MCYG_04979
I
0.000
MGYG_07902
Microsporum gypseum
MGYG_07902
I
0.000
GNLVRS01_PISO0M22936g
Millerozyma farinosa
GNLVRS01_PISO0M22936g
I
0.000
estExt_fgenesh1_pm.C_110082
Mycosphaerella fijiensis
estExt_fgenesh1_pm.C_110082
I
0.000
NCAS_0C01980
Naumovozyma castellii
NCAS_0C01980
I
0.000
NDAI_0E02700
Naumovozyma dairenensis
NDAI_0E02700
I
0.000
UCRNP2_3485
Neofusicoccum parvum
UCRNP2_3485
I
0.000
PABG_01574
Paracoccidioides brasiliensis
PABG_01574
I
0.000
PAAG_00645
Paracoccidioides sp lutzii
PAAG_00645
I
0.000
PMAA_013140
Penicillium marneffei
PMAA_013140
I
0.000
XP_002493499.1
Pichia pastoris
XP_002493499.1
I
0.000
MYCFIDRAFT_72135
Pseudocercospora fijiensis
MYCFIDRAFT_72135
I
0.000
PTT_15886
Pyrenophora teres
PTT_15886
I
0.000
PTRG_08080
Pyrenophora triticirepentis
PTRG_08080
I
0.000
Z518_09438
Rhinocladiella mackenziei
Z518_09438
I
0.000
SU7_0243
Saccharomyces arboricola
SU7_0243
I
0.000
SU7_3566
Saccharomyces arboricola
SU7_3566
I
0.000
1645_YBR182C
Saccharomyces bayanus
1645_YBR182C
I
0.000
25226_YPL089C
Saccharomyces bayanus
25226_YPL089C
I
0.000
Scas_Contig664.4
Saccharomyces castellii
Scas_Contig664.4
I
0.000
SMP1
Saccharomyces cerevisiae
YBR182C
D
0.000
RLM1
Saccharomyces cerevisiae
YPL089C
D
0.000
SKUD_178506
Saccharomyces kudriavzevii
SKUD_178506
I
0.000
SKUD_205813
Saccharomyces kudriavzevii
SKUD_205813
I
0.000
21954_YPL089C
Saccharomyces mikatae
21954_YPL089C
I
0.000
572_YBR182C
Saccharomyces mikatae
572_YBR182C
I
0.000
1735_Multiple
Saccharomyces paradoxus
1735_Multiple
I
0.000
SAPIO_CDS1437
Scedosporium apiospermum
SAPIO_CDS1437
I
0.000
SETTUDRAFT_183592
Setosphaeria turcica
SETTUDRAFT_183592
I
0.000
SNOG_15194
Stagonospora nodorum
SNOG_15194
I
0.000
PMAA_013140
Talaromyces marneffei
PMAA_013140
I
0.000
TSTA_004010
Talaromyces stipitatus
TSTA_004010
I
0.000
TBLA_0H03770
Tetrapisispora blattae
TBLA_0H03770
I
0.000
TPHA_0A01340
Tetrapisispora phaffii
TPHA_0A01340
I
0.000
TDEL_0A05090
Torulaspora delbrueckii
TDEL_0A05090
I
0.000
TEQG_02757
Trichophyton equinum
TEQG_02757
I
0.000
H101_08129
Trichophyton interdigitale
H101_08129
I
0.000
H102_05233
Trichophyton rubrum
H102_05233
I
0.000
H105_05252
Trichophyton soudanense
H105_05252
I
0.000
TESG_06676
Trichophyton tonsurans
TESG_06676
I
0.000
TRV_06898
Trichophyton verrucosum
TRV_06898
I
0.000
GSTUM_00008714001
Tuber melanosporum
GSTUM_00008714001
I
0.000
UREG_07644
Uncinocarpus reesii
UREG_07644
I
0.000
Kpol_1048p48
Vanderwaltozyma polyspora
Kpol_1048p48
I
0.000
PV09_04800
Verruconis gallopava
PV09_04800
I
0.000
ZYRO0A13464g
Zygosaccharomyces rouxii
ZYRO0A13464g
I
0.000