MDP0000249969 (Malus domestica)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 MDP0000249969 T050396_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK20225.1
M01128_2.00 		Cannabis sativa
NCACGTGVN
NBCACGTGN		 PBM
Lambert et al.(2019)
pTH11274 		0.863 0.857
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000249969 bHLH 76 124

Links

Other bHLH family TFs
Other Malus domestica TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_003_00568 Aquilegia coerulea Aquca_003_00568 I
fgenesh1_pg.C_scaffold_7002321 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7002321 I
CAMTA5 Arabidopsis thaliana AT4G16150 D
AT3G16940 Arabidopsis thaliana AT3G16940 I
Bostr.30275s0060 Boechera stricta Bostr.30275s0060 I
Bostr.19424s0974 Boechera stricta Bostr.19424s0974 I
BRADI1G27170 Brachypodium distachyon BRADI1G27170 I
Bo8g043280 Brassica oleracea Bo8g043280 I
Bo5g123580 Brassica oleracea Bo5g123580 I
Bra038040 Brassica rapa Bra038040 I
Bra022188 Brassica rapa Bra022188 I
PK20811.1 Cannabis sativa PK20811.1 I
Cagra.0053s0009 Capsella grandiflora Cagra.0053s0009 I
Cagra.4396s0001 Capsella grandiflora Cagra.4396s0001 I
Carubv10004090m.g Capsella rubella Carubv10004090m.g I
Carubv10012963m.g Capsella rubella Carubv10012963m.g I
Ca_02997 Cicer arietinum Ca_02997 I
Cla009415 Citrullus lanatus Cla009415 I
Ciclev10004273m.g Citrus clementina Ciclev10004273m.g I
orange1.1g002476m.g Citrus sinensis orange1.1g002476m.g I
Cucsa.325250 Cucumis sativus Cucsa.325250 I
Eucgr.H04035 Eucalyptus grandis Eucgr.H04035 I
Thhalv10020047m.g Eutrema salsugineum Thhalv10020047m.g I
Thhalv10024342m.g Eutrema salsugineum Thhalv10024342m.g I
GLYMA17G03510 Glycine max GLYMA17G03510 I
GLYMA15G15350 Glycine max GLYMA15G15350 I
GLYMA09G04310 Glycine max GLYMA09G04310 I
GLYMA07G37090 Glycine max GLYMA07G37090 I
Gorai.011G198600 Gossypium raimondii Gorai.011G198600 I
Gorai.006G079000 Gossypium raimondii Gorai.006G079000 I
Gorai.005G065700 Gossypium raimondii Gorai.005G065700 I
chr4.CM0429.140.nd Lotus japonicus chr4.CM0429.140.nd I
MDP0000233860 Malus domestica MDP0000233860 I
MDP0000167705 Malus domestica MDP0000167705 I
MDP0000164873 Malus domestica MDP0000164873 I
cassava40488.m1 Manihot esculenta cassava40488.m1 I
MTR_2g034650 Medicago truncatula MTR_2g034650 I
MTR_4g121840 Medicago truncatula MTR_4g121840 I
mgf012030m Mimulus guttatus mgf012030m I
GSMUA_Achr8G10490_001 Musa acuminata GSMUA_Achr8G10490_001 I
OGLUM07G13800 Oryza glumaepatula OGLUM07G13800 I
BGIOSGA025720 Oryza indica BGIOSGA025720 I
BGIOSGA025721 Oryza indica BGIOSGA025721 I
OLONG_014480 Oryza longistaminata OLONG_014480 I
ONIVA07G13300 Oryza nivara ONIVA07G13300 I
OPUNC07G13630 Oryza punctata OPUNC07G13630 I
ORUFI07G15090 Oryza rufipogon ORUFI07G15090 I
OS07G0490200 Oryza sativa OS07G0490200 I
Q2WEL1_ORYSA Oryza sativa Q2WEL1_ORYSA D
Pavir.Ba00948 Panicum virgatum Pavir.Ba00948 I
Pavir.J11066 Panicum virgatum Pavir.J11066 I
POPTR_0008s10730 Populus trichocarpa POPTR_0008s10730 I
PRUPE_ppa001493mg Prunus persica PRUPE_ppa001493mg I
29889.m003269 Ricinus communis 29889.m003269 I
Si028862m.g Setaria italica Si028862m.g I
Solyc01g060170.2 Solanum lycopersicum Solyc01g060170.2 I
Sb02g033620 Sorghum bicolor Sb02g033620 I
TCM_021327 Theobroma cacao TCM_021327 I
Traes_2BS_1A9DB766A Triticum aestivum Traes_2BS_1A9DB766A I
Traes_2AS_4C4190DEB Triticum aestivum Traes_2AS_4C4190DEB I
Traes_2DS_119508A0E Triticum aestivum Traes_2DS_119508A0E I
GRMZM2G032336 Zea mays GRMZM2G032336 I