Pavir.Aa02015 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Aa02015 T050650_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK18401.1
M01126_2.00 		Cannabis sativa
NNNVCACGTGBN
NVCACGTGBNNN		 PBM
Lambert et al.(2019)
pTH11272 		0.863 0.804
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Aa02015.1.p bHLH 36 86
Pavir.Aa02015.2.p bHLH 1 41

Links

Other bHLH family TFs
Other Panicum virgatum TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTERF4 Bos taurus ENSBTAG00000000784 N
MTERF4 Cavia porcellus ENSCPOG00000025700 N
ENSDNOG00000004661 Dasypus novemcinctus ENSDNOG00000004661 N
MTERF4 Equus caballus ENSECAG00000011622 N
MTERF4 Felis catus ENSFCAG00000010451 N
MTERF4 Homo sapiens ENSG00000122085 N
ENSSTOG00000016295 Ictidomys tridecemlineatus ENSSTOG00000016295 N
MTERF4 Loxodonta africana ENSLAFG00000021960 N
ENSP00000241527 Macaca fascicularis ENSP00000241527 N
ENSMPUG00000000155 Mustela putorius furo ENSMPUG00000000155 N
Myotis_brandtii_MTERFD2_10035083 Myotis brandtii Myotis_brandtii_MTERFD2_10035083 N
MTERF4 Otolemur garnettii ENSOGAG00000024565 N
ENSOARG00000018079 Ovis aries ENSOARG00000018079 N
MTERF4 Tupaia belangeri ENSTBEG00000010790 N
MTERF4 Tursiops truncatus ENSTTRG00000015232 N