Pavir.Ba00676 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Ba00676 T050673_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G42280
M06733_2.00 		Arabidopsis thaliana
DNCMACTTGYH
DRCAAGTKGNH		 Dap-seq
OMalley et al.(2016)
bHLH130_col_a 		0.867 0.961
BHLH122
M06724_2.00 		Arabidopsis thaliana
NNDNCMACTTGNNH
DNNCAAGTKGNHNN		 Dap-seq
OMalley et al.(2016)
bHLH122_col100_a 		0.844 0.902
BHLH122
M06725_2.00 		Arabidopsis thaliana
DNCMACTTGYN
NRCAAGTKGNH		 Dap-seq
OMalley et al.(2016)
bHLH122_colamp_a 		0.844 0.902
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba00676.1.p bHLH 304 354
Pavir.Ba00676.2.p bHLH 303 353

Links

Other bHLH family TFs
Other Panicum virgatum TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g02718 Acanthocheilonema viteae nAv.1.0.1.g02718 I
ACYPI010036 Acyrthosiphon pisum ACYPI010036 I
AAEL000254 Aedes aegypti AAEL000254 I
ENSAMEG00000005577 Ailuropoda melanoleuca ENSAMEG00000005577 I
ENSAMEG00000011711 Ailuropoda melanoleuca ENSAMEG00000011711 I
ENSAMEG00000012569 Ailuropoda melanoleuca ENSAMEG00000012569 I
Alligator_sinensis_CCG000434.1 Alligator sinensis Alligator_sinensis_CCG000434.1 I
Alligator_sinensis_CCG015706.1 Alligator sinensis Alligator_sinensis_CCG015706.1 I
Alligator_sinensis_CCG017934.2 Alligator sinensis Alligator_sinensis_CCG017934.2 I
ENSAPLG00000003407 Anas platyrhynchos ENSAPLG00000003407 I
ANCCAN_03078 Ancylostoma caninum ANCCAN_03078 I
ANCDUO_02770 Ancylostoma duodenale ANCDUO_02770 I
ACAC_0000812601 Angiostrongylus cantonensis ACAC_0000812601 I
ACOC_0000978701 Angiostrongylus costaricensis ACOC_0000978701 I
ASIM_0001221201 Anisakis simplex ASIM_0001221201 I
NFIX Anolis carolinensis ENSACAG00000017054 I
ENSACAG00000017087 Anolis carolinensis ENSACAG00000017087 I
AALB006645 Anopheles albimanus AALB006645 I
AARA001109 Anopheles arabiensis AARA001109 I
AATE000288 Anopheles atroparvus AATE000288 I
ACOM036010 Anopheles coluzzii ACOM036010 I
ACUA012405 Anopheles culicifacies ACUA012405 I
ACUA022542 Anopheles culicifacies ACUA022542 I
ADAC002741 Anopheles darlingi ADAC002741 I
ADIR000974 Anopheles dirus ADIR000974 I
AEPI005797 Anopheles epiroticus AEPI005797 I
AFAF009296 Anopheles farauti AFAF009296 I
NFI Anopheles gambiae AGAP000068 I
AMEC001904 Anopheles melas AMEC001904 I
AMEC002310 Anopheles melas AMEC002310 I
AMEM002115 Anopheles merus AMEM002115 I
AMIN002133 Anopheles minimus AMIN002133 I
ASIS017368 Anopheles sinensis ASIS017368 I
ASTEI06207 Anopheles stephensi ASTEI06207 I
GB44961 Apis mellifera GB44961 I
Afo_R007642 Aptenodytes forsteri Afo_R007642 I
ASU_05356 Ascaris suum ASU_05356 I
ENSAMXG00000017908 Astyanax mexicanus ENSAMXG00000017908 I
ACEP19823 Atta cephalotes ACEP19823 I
BGLB002764 Biomphalaria glabrata BGLB002764 I
BGIBMGA013352 Bombyx mori BGIBMGA013352 I
ENSP00000342859-D1 Bos grunniens ENSP00000342859-D1 I
ENSP00000383958-D1 Bos grunniens ENSP00000383958-D1 I
yakG029648 Bos grunniens yakG029648 I
NFIA Bos taurus ENSBTAG00000000074 I
NFIC Bos taurus ENSBTAG00000008520 I
NFIX Bos taurus ENSBTAG00000018229 I
fgenesh2_pg.scaffold_342000046 Branchiostoma floridae fgenesh2_pg.scaffold_342000046 I
gw.438.21.1 Branchiostoma floridae gw.438.21.1 I
Bm7659 Brugia malayi Bm7659 I
BXY_1713100 Bursaphelenchus xylophilus BXY_1713100 I
NFIX Callithrix jacchus ENSCJAG00000004603 I
NFIC Callithrix jacchus ENSCJAG00000014813 I
NFIA Callithrix jacchus ENSCJAG00000016165 I
Aan_R000637 Calypte anna Aan_R000637 I
Aan_R011678 Calypte anna Aan_R011678 I
Cflo_01240--XP_393740.3_APIME Camponotus floridanus Cflo_01240--XP_393740.3_APIME I
NFIX Canis familiaris ENSCAFG00000017009 I
NFIC Canis familiaris ENSCAFG00000019246 I
NFIA Canis familiaris ENSCAFG00000023117 I
CapteG107856 Capitella teleta CapteG107856 I
NFIA Cavia porcellus ENSCPOG00000010091 I
NFIX Cavia porcellus ENSCPOG00000022563 I
Cmyd_10002384 Chelonia mydas Cmyd_10002384 I
Cmyd_10005910 Chelonia mydas Cmyd_10005910 I
ENSCSAG00000001333 Chlorocebus sabaeus ENSCSAG00000001333 I
ENSCSAG00000006510 Chlorocebus sabaeus ENSCSAG00000006510 I
ENSCSAG00000011182 Chlorocebus sabaeus ENSCSAG00000011182 I
ENSCHOG00000006447 Choloepus hoffmanni ENSCHOG00000006447 I
CGI_10025830 Crassostrea gigas CGI_10025830 I
CpipJ_CPIJ009526 Culex pipiens CpipJ_CPIJ009526 I
CPIJ009526 Culex quinquefasciatus CPIJ009526 I
CGOC_0000769801 Cylicostephanus goldi CGOC_0000769801 I
nfic Danio rerio ENSDARG00000043210 I
nfia Danio rerio ENSDARG00000062420 I
DAPPUDRAFT_52430 Daphnia pulex DAPPUDRAFT_52430 I
ENSDNOG00000002190 Dasypus novemcinctus ENSDNOG00000002190 I
ENSDNOG00000041466 Dasypus novemcinctus ENSDNOG00000041466 I
NFIC Dasypus novemcinctus ENSDNOG00000042450 I
YQE_09289 Dendroctonus ponderosae YQE_09289 I
DICVIV_06041 Dictyocaulus viviparus DICVIV_06041 I
Nfic Dipodomys ordii ENSDORG00000002466 I
Nfia Dipodomys ordii ENSDORG00000005150 I
nDi.2.2.2.g05388 Dirofilaria immitis nDi.2.2.2.g05388 I
DME_0000465201 Dracunculus medinensis DME_0000465201 I
GF21690 Drosophila ananassae FBgn0098690 I
GG16454 Drosophila erecta FBgn0108685 I
GH23980 Drosophila grimshawi FBgn0131437 I
NfI Drosophila melanogaster FBgn0042696 D
GI14107 Drosophila mojavensis FBgn0136861 I
GL18152 Drosophila persimilis FBgn0155755 I
GM26787 Drosophila sechellia FBgn0181640 I
GD24387 Drosophila simulans FBgn0195728 I
GJ21334 Drosophila virilis FBgn0208464 I
GK13608 Drosophila willistoni FBgn0215616 I
GE14520 Drosophila yakuba FBgn0232122 I
NFIX Echinops telfairi ENSETEG00000003584 I
NFIC Echinops telfairi ENSETEG00000006952 I
NFIA Echinops telfairi ENSETEG00000017068 I
EEL_0000990501 Elaeophora elaphi EEL_0000990501 I
EVEC_0001120201 Enterobius vermicularis EVEC_0001120201 I
NFIC Equus caballus ENSECAG00000008134 I
NFIA Equus caballus ENSECAG00000015574 I
NFIX Equus caballus ENSECAG00000019690 I
NFIA Erinaceus europaeus ENSEEUG00000015082 I
NFIX Felis catus ENSFCAG00000000481 I
NFIC Felis catus ENSFCAG00000000880 I
NFIA Felis catus ENSFCAG00000005997 I
ENSFALG00000011533 Ficedula albicollis ENSFALG00000011533 I
ENSFALG00000012430 Ficedula albicollis ENSFALG00000012430 I
cNFI-A Gallus gallus ENSGALG00000010924 I
ENSGALG00000027938 Gallus gallus ENSGALG00000027938 I
nfic Gasterosteus aculeatus ENSGACG00000002028 I
nfia Gasterosteus aculeatus ENSGACG00000003153 I
Gfo_R007599 Geospiza fortis Gfo_R007599 I
NFIX Gorilla gorilla ENSGGOG00000001831 I
NFIC Gorilla gorilla ENSGGOG00000006557 I
NFIA Gorilla gorilla ENSGGOG00000027445 I
HCOI01452900 Haemonchus contortus HCOI01452900 I
HHAL002936-PA Halyomorpha halys HHAL002936-PA I
Hsal_10682--XP_393740.3_APIME Harpegnathos saltator Hsal_10682--XP_393740.3_APIME I
HMEL003745 Heliconius melpomene HMEL003745 I
HPBE_0002427601 Heligmosomoides bakeri HPBE_0002427601 I
NFIX Homo sapiens ENSG00000008441 D
NFIC Homo sapiens ENSG00000141905 D
NFIA Homo sapiens ENSG00000162599 D
ENSSTOG00000007848 Ictidomys tridecemlineatus ENSSTOG00000007848 I
ENSSTOG00000024218 Ictidomys tridecemlineatus ENSSTOG00000024218 I
ISCW004440 Ixodes scapularis ISCW004440 I
ENSLACG00000004873 Latimeria chalumnae ENSLACG00000004873 I
ENSLACG00000014913 Latimeria chalumnae ENSLACG00000014913 I
ENSLOCG00000001284 Lepisosteus oculatus ENSLOCG00000001284 I
ENSLOCG00000009919 Lepisosteus oculatus ENSLOCG00000009919 I
LDEC011938 Leptinotarsa decemlineata LDEC011938 I
nLs.2.1.2.g06746 Litomosoides sigmodontis nLs.2.1.2.g06746 I
LOAG_08303 Loa loa LOAG_08303 I
LotgiG215606 Lottia gigantea LotgiG215606 I
NFIC Loxodonta africana ENSLAFG00000007134 I
NFIX Loxodonta africana ENSLAFG00000017040 I
ENSLAFG00000025943 Loxodonta africana ENSLAFG00000025943 I
LCUP004691 Lucilia cuprina LCUP004691 I
LLOJ009491 Lutzomyia longipalpis LLOJ009491 I
ENSP00000383958 Macaca fascicularis ENSP00000383958 I
ENSP00000408621 Macaca fascicularis ENSP00000408621 I
NFIC Macaca mulatta ENSMMUG00000003439 I
NFIA Macaca mulatta ENSMMUG00000013840 I
NFIX Macaca mulatta ENSMMUG00000019292 I
ENSMEUG00000003176 Macropus eugenii ENSMEUG00000003176 I
ENSMEUG00000010629 Macropus eugenii ENSMEUG00000010629 I
ENSMEUG00000015063 Macropus eugenii ENSMEUG00000015063 I
MESCA001033 Megaselia scalaris MESCA001033 I
ENSMGAG00000002720 Meleagris gallopavo ENSMGAG00000002720 I
ENSMGAG00000011639 Meleagris gallopavo ENSMGAG00000011639 I
MhA1_Contig410.frz3.gene15 Meloidogyne hapla MhA1_Contig410.frz3.gene15 I
NFIX Microcebus murinus ENSMICG00000000785 I
ENSMICG00000005075 Microcebus murinus ENSMICG00000005075 I
NFIB Microcebus murinus ENSMICG00000005833 I
NFIA Monodelphis domestica ENSMODG00000002475 I
NFIC Monodelphis domestica ENSMODG00000006935 I
NFIX Monodelphis domestica ENSMODG00000011587 I
MDOA004700 Musca domestica MDOA004700 I
ENSMPUG00000003850 Mustela putorius furo ENSMPUG00000003850 I
ENSMPUG00000004325 Mustela putorius furo ENSMPUG00000004325 I
ENSMPUG00000007524 Mustela putorius furo ENSMPUG00000007524 I
Nfix Mus musculus ENSMUSG00000001911 I
Nfia Mus musculus ENSMUSG00000028565 D
Nfic Mus musculus ENSMUSG00000055053 D
Myotis_brandtii_Nfia_10021409 Myotis brandtii Myotis_brandtii_Nfia_10021409 I
Myotis_brandtii_NFIC_10016328 Myotis brandtii Myotis_brandtii_NFIC_10016328 I
Myotis_brandtii_NFIX_10009225 Myotis brandtii Myotis_brandtii_NFIX_10009225 I
NFIC Myotis lucifugus ENSMLUG00000006476 I
NFIX Myotis lucifugus ENSMLUG00000012794 I
ENSMLUG00000024011 Myotis lucifugus ENSMLUG00000024011 I
NV15784 Nasonia vitripennis NV15784 I
NECAME_05767 Necator americanus NECAME_05767 N
ENSNLEG00000012980 Nomascus leucogenys ENSNLEG00000012980 I
NFIX Ochotona princeps ENSOPRG00000009437 I
Ocbimv22006045m.g Octopus bimaculoides Ocbimv22006045m.g I
OFLC_0001047301 Onchocerca flexuosa OFLC_0001047301 I
nOo.2.0.1.g12948 Onchocerca ochengi nOo.2.0.1.g12948 I
WBGene00247194 Onchocerca volvulus WBGene00247194 I
Ogr06404 Ophisaurus gracilis Ogr06404 I
ENSONIG00000007717 Oreochromis niloticus ENSONIG00000007717 I
ENSOANG00000000670 Ornithorhynchus anatinus ENSOANG00000000670 I
ENSOANG00000012488 Ornithorhynchus anatinus ENSOANG00000012488 I
NFIX Ornithorhynchus anatinus ENSOANG00000030883 I
NFIA Oryctolagus cuniculus ENSOCUG00000005893 I
nfia Oryzias latipes ENSORLG00000003529 I
NFIX Otolemur garnettii ENSOGAG00000017133 I
NFIC Otolemur garnettii ENSOGAG00000026321 I
ENSOARG00000008860 Ovis aries ENSOARG00000008860 I
ENSOARG00000009535 Ovis aries ENSOARG00000009535 I
ENSOARG00000012667 Ovis aries ENSOARG00000012667 I
NFIA Pan troglodytes ENSPTRG00000000802 I
NFIC Pan troglodytes ENSPTRG00000010261 I
ENSPANG00000004923 Papio anubis ENSPANG00000004923 I
ENSPANG00000018992 Papio anubis ENSPANG00000018992 I
PHUM301410 Pediculus humanus PHUM301410 I
ENSPSIG00000005327 Pelodiscus sinensis ENSPSIG00000005327 I
ENSPSIG00000013902 Pelodiscus sinensis ENSPSIG00000013902 I
ENSPFOG00000000946 Poecilia formosa ENSPFOG00000000946 I
ENSPFOG00000008414 Poecilia formosa ENSPFOG00000008414 I
Pvit_08116 Pogona vitticeps Pvit_08116 I
ENSPPYG00000001290 Pongo abelii ENSPPYG00000001290 I
ENSPPYG00000009371 Pongo abelii ENSPPYG00000009371 I
ENSPPYG00000009620 Pongo abelii ENSPPYG00000009620 I
scaffold324-EXSNAP2012.31 Pristionchus exspectatus scaffold324-EXSNAP2012.31 I
PPA18485 Pristionchus pacificus PPA18485 I
NFIC Procavia capensis ENSPCAG00000002205 I
NFIX Procavia capensis ENSPCAG00000003605 I
NFIA Procavia capensis ENSPCAG00000012769 I
NFIC Pteropus vampyrus ENSPVAG00000004084 I
NFIA Pteropus vampyrus ENSPVAG00000005805 I
NFIX Pteropus vampyrus ENSPVAG00000015074 I
Nf1x Rattus norvegicus ENSRNOG00000002983 I
Nfic Rattus norvegicus ENSRNOG00000004505 I
Nfia Rattus norvegicus ENSRNOG00000006966 D
RPRC005635 Rhodnius prolixus RPRC005635 I
nRc.2.0.1.g39853 Romanomermis culicivorax nRc.2.0.1.g39853 I
Sakowv30035029m.g Saccoglossus kowalevskii Sakowv30035029m.g I
ENSSHAG00000008822 Sarcophilus harrisii ENSSHAG00000008822 I
ENSSHAG00000009432 Sarcophilus harrisii ENSSHAG00000009432 I
ENSSHAG00000014449 Sarcophilus harrisii ENSSHAG00000014449 I
SINV21439 Solenopsis invicta SINV21439 I
NFIX Sorex araneus ENSSARG00000002265 I
NFIA Sorex araneus ENSSARG00000004476 I
L596_g9152 Steinernema carpocapsae L596_g9152 I
L889_g1991 Steinernema feltiae L889_g1991 I
L893_g18810 Steinernema glaseri L893_g18810 I
L898_g32383 Steinernema monticolum L898_g32383 I
L892_g4417 Steinernema scapterisci L892_g4417 I
SMAR010352 Strigamia maritima SMAR010352 I
SPU_023339 Strongylocentrotus purpuratus SPU_023339 I
SVUK_0000435801 Strongylus vulgaris SVUK_0000435801 I
NFIX Sus scrofa ENSSSCG00000013742 I
SMUV_0000807101 Syphacia muris SMUV_0000807101 I
NFIC Taeniopygia guttata ENSTGUG00000000182 I
NFIA Taeniopygia guttata ENSTGUG00000009745 I
NFIX Takifugu rubripes ENSTRUG00000005030 I
ENSTSYG00000007548 Tarsius syrichta ENSTSYG00000007548 I
tetur26g01860 Tetranychus urticae tetur26g01860 I
ENSTNIG00000003955 Tetraodon nigroviridis ENSTNIG00000003955 I
TCNE_0001032701 Toxocara canis TCNE_0001032701 I
TC001775 Tribolium castaneum TC001775 I
D917_08921 Trichinella nativa D917_08921 I
D917_08922 Trichinella nativa D917_08922 I
TMUE_s0020006100 Trichuris muris TMUE_s0020006100 I
D918_01205 Trichuris suis D918_01205 I
TTRE_0000653901 Trichuris trichiura TTRE_0000653901 I
NFIX Tupaia belangeri ENSTBEG00000014687 I
NFIX Tursiops truncatus ENSTTRG00000006368 I
NFIC Tursiops truncatus ENSTTRG00000009660 I
NFIA Tursiops truncatus ENSTTRG00000011222 I
NFIA Vicugna pacos ENSVPAG00000004054 I
WUBG_02198 Wuchereria bancrofti WUBG_02198 I
AAB38017 Xenopus laevis AAB38017 I
AAC25159 Xenopus laevis AAC25159 I
AAC25161 Xenopus laevis AAC25161 I
AAI70116 Xenopus laevis AAI70116 I
nfix.L Xenopus laevis XB-GENE-992653 I
nfia Xenopus tropicalis XB-GENE-1010393 I
nfic Xenopus tropicalis XB-GENE-484367 I
nfix Xenopus tropicalis XB-GENE-992650 I
L798_07165 Zootermopsis nevadensis L798_07165 I