Pavir.Fa00118 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Fa00118 T050767_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fa00118.1.p bHLH 103 152

Links

Other bHLH family TFs
Other Panicum virgatum TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_01879 Aegilops tauschii F775_01879 N 0.881
BRADI3G41950 Brachypodium distachyon BRADI3G41950 N 0.844
BRADI4G35400 Brachypodium distachyon BRADI4G35400 N 0.911
Eucgr.E01042 Eucalyptus grandis Eucgr.E01042 I 0.848
Eucgr.E01049 Eucalyptus grandis Eucgr.E01049 I 0.848
Gorai.004G129600 Gossypium raimondii Gorai.004G129600 I 0.843
MLOC_40535 Hordeum vulgare MLOC_40535 N 0.900
LPERR03G22350 Leersia perrieri LPERR03G22350 I 0.876
LPERR08G19100 Leersia perrieri LPERR08G19100 I 0.857
LPERR09G12780 Leersia perrieri LPERR09G12780 I 0.887
ORGLA09G0131400 Oryza glaberrima ORGLA09G0131400 I 0.887
ORGLA08G0221300 Oryza glaberrima ORGLA08G0221300 I 0.876
OGLUM08G23650 Oryza glumaepatula OGLUM08G23650 I 0.876
OGLUM09G17250 Oryza glumaepatula OGLUM09G17250 I 0.887
BGIOSGA029426 Oryza indica BGIOSGA029426 I 0.887
BGIOSGA026551 Oryza indica BGIOSGA026551 I 0.876
OMERI08G17270 Oryza meridionalis OMERI08G17270 I 0.876
ONIVA08G25370 Oryza nivara ONIVA08G25370 I 0.876
ONIVA09G17720 Oryza nivara ONIVA09G17720 I 0.887
ORUFI08G24840 Oryza rufipogon ORUFI08G24840 I 0.876
ORUFI09G17940 Oryza rufipogon ORUFI09G17940 I 0.887
OS09G0519100 Oryza sativa OS09G0519100 I 0.887
OS08G0543700 Oryza sativa OS08G0543700 I 0.876
Pavir.J01049 Panicum virgatum Pavir.J01049 I 0.887
Pavir.Fb02191 Panicum virgatum Pavir.Fb02191 N 0.911
Pavir.Fb00905 Panicum virgatum Pavir.Fb00905 N 0.914
Pavir.Fa00117 Panicum virgatum Pavir.Fa00117 N 0.858
Pavir.Ba01307 Panicum virgatum Pavir.Ba01307 I 0.887
Pavir.Ba01305 Panicum virgatum Pavir.Ba01305 I 0.887
Pavir.J27331 Panicum virgatum Pavir.J27331 N 0.852
Pavir.Fb02348 Panicum virgatum Pavir.Fb02348 N 0.858
Pavir.J40111 Panicum virgatum Pavir.J40111 I 0.887
Si015024m.g Setaria italica Si015024m.g N 0.911
Si015026m.g Setaria italica Si015026m.g N 0.911
Si015072m.g Setaria italica Si015072m.g N 0.863
Si015213m.g Setaria italica Si015213m.g N 0.870
Si015343m.g Setaria italica Si015343m.g N 0.911
Si015513m.g Setaria italica Si015513m.g I 0.887
Si031900m.g Setaria italica Si031900m.g I 0.887
Si032741m.g Setaria italica Si032741m.g I 0.887
Si014241m.g Setaria italica Si014241m.g N 0.870
Sb2273s002010 Sorghum bicolor Sb2273s002010 N 0.890
Sb07g025340 Sorghum bicolor Sb07g025340 N 0.903
Sb07g025330 Sorghum bicolor Sb07g025330 N 0.911
Sb07g025320 Sorghum bicolor Sb07g025320 N 0.852
Sb07g025310 Sorghum bicolor Sb07g025310 I 0.876
Sb03g006510 Sorghum bicolor Sb03g006510 N 0.846
Sb02g030120 Sorghum bicolor Sb02g030120 I 0.887
Sb02g030110 Sorghum bicolor Sb02g030110 I 0.887
Traes_5DL_5DA6E1A09 Triticum aestivum Traes_5DL_5DA6E1A09 N 0.911
Traes_5DL_F32936F9C Triticum aestivum Traes_5DL_F32936F9C N 0.911
Traes_5BL_E86F89671 Triticum aestivum Traes_5BL_E86F89671 N 0.911
Traes_5BL_D45BBFEBC Triticum aestivum Traes_5BL_D45BBFEBC N 0.870
Traes_5BL_C753673FD Triticum aestivum Traes_5BL_C753673FD N 0.911
Traes_2BL_F38E03233 Triticum aestivum Traes_2BL_F38E03233 N 0.870
Traes_2BL_F38E032331 Triticum aestivum Traes_2BL_F38E032331 N 0.870
TRIUR3_29141 Triticum urartu TRIUR3_29141 N 0.870
GRMZM2G472671 Zea mays GRMZM2G472671 N 0.911
GRMZM2G107560 Zea mays GRMZM2G107560 I 0.887
GRMZM2G038479 Zea mays GRMZM2G038479 I 0.887
GRMZM2G013688 Zea mays GRMZM2G013688 I 0.887