Pavir.Fa02284 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Fa02284 T050774_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fa02284.1.p bHLH 80 131

Links

Other bHLH family TFs
Other Panicum virgatum TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_31340 Aegilops tauschii F775_31340 N 0.914
BRADI3G14590 Brachypodium distachyon BRADI3G14590 N 0.901
Gorai.007G314800 Gossypium raimondii Gorai.007G314800 N 0.867
MLOC_6315 Hordeum vulgare MLOC_6315 N 0.914
LPERR08G02470 Leersia perrieri LPERR08G02470 N 0.901
chr3.CM0155.80.nd Lotus japonicus chr3.CM0155.80.nd N 0.842
mgf009119m Mimulus guttatus mgf009119m I 0.859
GSMUA_Achr11G14790_001 Musa acuminata GSMUA_Achr11G14790_001 I 0.838
GSMUA_Achr8G33180_001 Musa acuminata GSMUA_Achr8G33180_001 I 0.855
OB08G12550 Oryza brachyantha OB08G12550 N 0.900
ORGLA08G0018000 Oryza glaberrima ORGLA08G0018000 N 0.900
OGLUM08G02420 Oryza glumaepatula OGLUM08G02420 N 0.900
BGIOSGA027691 Oryza indica BGIOSGA027691 N 0.900
OLONG_003616 Oryza longistaminata OLONG_003616 N 0.900
ONIVA08G02550 Oryza nivara ONIVA08G02550 N 0.900
OPUNC08G02220 Oryza punctata OPUNC08G02220 N 0.900
ORUFI08G02650 Oryza rufipogon ORUFI08G02650 N 0.900
OS08G0138500 Oryza sativa OS08G0138500 N 0.900
Pavir.J34678 Panicum virgatum Pavir.J34678 N 0.884
Pavir.J05070 Panicum virgatum Pavir.J05070 N 0.914
Pavir.Fb00223 Panicum virgatum Pavir.Fb00223 N 0.914
Si014339m.g Setaria italica Si014339m.g N 0.914
Sb04g001200 Sorghum bicolor Sb04g001200 N 0.861
Sb07g002900 Sorghum bicolor Sb07g002900 N 0.890
Traes_7AL_B9345EB83 Triticum aestivum Traes_7AL_B9345EB83 N 0.914
Traes_7DL_88B60203A Triticum aestivum Traes_7DL_88B60203A N 0.914
Traes_7BL_6324A95B5 Triticum aestivum Traes_7BL_6324A95B5 N 0.914
TRIUR3_32784 Triticum urartu TRIUR3_32784 N 0.914
GRMZM2G314882 Zea mays GRMZM2G314882 N 0.861
GRMZM2G017586 Zea mays GRMZM2G017586 N 0.890
GRMZM2G093744 Zea mays GRMZM2G093744 N 0.890
GRMZM5G856837 Zea mays GRMZM5G856837 N 0.861