Pavir.J19529 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.J19529 T050901_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J19529.1.p bHLH 114 158

Links

Other bHLH family TFs
Other Panicum virgatum TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LPERR09G12780 Leersia perrieri LPERR09G12780 I 0.858
LPERR03G22350 Leersia perrieri LPERR03G22350 I 0.847
GSMUA_Achr1G08130_001 Musa acuminata GSMUA_Achr1G08130_001 N 0.852
ORGLA09G0131400 Oryza glaberrima ORGLA09G0131400 I 0.858
ORGLA08G0221300 Oryza glaberrima ORGLA08G0221300 I 0.847
OGLUM09G17250 Oryza glumaepatula OGLUM09G17250 I 0.858
OGLUM08G23650 Oryza glumaepatula OGLUM08G23650 I 0.847
BGIOSGA029426 Oryza indica BGIOSGA029426 I 0.858
BGIOSGA026551 Oryza indica BGIOSGA026551 I 0.847
OMERI08G17270 Oryza meridionalis OMERI08G17270 I 0.847
ONIVA08G25370 Oryza nivara ONIVA08G25370 I 0.847
ONIVA09G17720 Oryza nivara ONIVA09G17720 I 0.858
ORUFI08G24840 Oryza rufipogon ORUFI08G24840 I 0.847
ORUFI09G17940 Oryza rufipogon ORUFI09G17940 I 0.858
OS08G0543700 Oryza sativa OS08G0543700 I 0.847
OS09G0519100 Oryza sativa OS09G0519100 I 0.858
Pavir.J40111 Panicum virgatum Pavir.J40111 I 0.858
Pavir.J01049 Panicum virgatum Pavir.J01049 I 0.858
Pavir.Ba01307 Panicum virgatum Pavir.Ba01307 I 0.858
Pavir.Ba01305 Panicum virgatum Pavir.Ba01305 I 0.858
Si015513m.g Setaria italica Si015513m.g I 0.858
Si031900m.g Setaria italica Si031900m.g I 0.858
Si032741m.g Setaria italica Si032741m.g I 0.858
Sb02g030110 Sorghum bicolor Sb02g030110 I 0.858
Sb02g030120 Sorghum bicolor Sb02g030120 I 0.858
Sb07g025310 Sorghum bicolor Sb07g025310 I 0.847
GRMZM2G013688 Zea mays GRMZM2G013688 I 0.858
GRMZM2G038479 Zea mays GRMZM2G038479 I 0.858
GRMZM2G107560 Zea mays GRMZM2G107560 I 0.858
GRMZM2G303463 Zea mays GRMZM2G303463 I 0.840