Pavir.J27331 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.J27331 T050921_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J27331.1.p bHLH 110 159

Links

Other bHLH family TFs
Other Panicum virgatum TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI3G41930 Brachypodium distachyon BRADI3G41930 N 0.844
BRADI3G41950 Brachypodium distachyon BRADI3G41950 N 0.865
BRADI4G35400 Brachypodium distachyon BRADI4G35400 N 0.855
MLOC_40535 Hordeum vulgare MLOC_40535 N 0.844
LPERR09G12780 Leersia perrieri LPERR09G12780 I 0.879
LPERR08G19100 Leersia perrieri LPERR08G19100 I 0.849
LPERR03G22350 Leersia perrieri LPERR03G22350 I 0.868
ORGLA09G0131400 Oryza glaberrima ORGLA09G0131400 I 0.879
ORGLA08G0221300 Oryza glaberrima ORGLA08G0221300 I 0.868
OGLUM08G23650 Oryza glumaepatula OGLUM08G23650 I 0.868
OGLUM09G17250 Oryza glumaepatula OGLUM09G17250 I 0.879
BGIOSGA026551 Oryza indica BGIOSGA026551 I 0.868
BGIOSGA029426 Oryza indica BGIOSGA029426 I 0.879
OMERI08G17270 Oryza meridionalis OMERI08G17270 I 0.868
ONIVA08G25370 Oryza nivara ONIVA08G25370 I 0.868
ONIVA09G17720 Oryza nivara ONIVA09G17720 I 0.879
ORUFI08G24840 Oryza rufipogon ORUFI08G24840 I 0.868
ORUFI09G17940 Oryza rufipogon ORUFI09G17940 I 0.879
OS08G0543700 Oryza sativa OS08G0543700 I 0.868
OS09G0519100 Oryza sativa OS09G0519100 I 0.879
Pavir.J40111 Panicum virgatum Pavir.J40111 I 0.879
Pavir.J01049 Panicum virgatum Pavir.J01049 I 0.879
Pavir.Fb02191 Panicum virgatum Pavir.Fb02191 N 0.855
Pavir.Fb00905 Panicum virgatum Pavir.Fb00905 N 0.852
Pavir.Fa00118 Panicum virgatum Pavir.Fa00118 N 0.852
Pavir.Ba01307 Panicum virgatum Pavir.Ba01307 I 0.879
Pavir.Ba01305 Panicum virgatum Pavir.Ba01305 I 0.879
Si015513m.g Setaria italica Si015513m.g I 0.879
Si032741m.g Setaria italica Si032741m.g I 0.879
Si031900m.g Setaria italica Si031900m.g I 0.879
Si015343m.g Setaria italica Si015343m.g N 0.855
Si015072m.g Setaria italica Si015072m.g N 0.842
Si015026m.g Setaria italica Si015026m.g N 0.855
Si015024m.g Setaria italica Si015024m.g N 0.855
Sb07g025340 Sorghum bicolor Sb07g025340 N 0.840
Sb07g025330 Sorghum bicolor Sb07g025330 N 0.855
Sb07g025310 Sorghum bicolor Sb07g025310 I 0.868
Sb02g030120 Sorghum bicolor Sb02g030120 I 0.879
Sb02g030110 Sorghum bicolor Sb02g030110 I 0.879
Traes_5BL_C753673FD Triticum aestivum Traes_5BL_C753673FD N 0.855
Traes_5BL_E86F89671 Triticum aestivum Traes_5BL_E86F89671 N 0.855
Traes_5DL_5DA6E1A09 Triticum aestivum Traes_5DL_5DA6E1A09 N 0.855
Traes_5DL_F32936F9C Triticum aestivum Traes_5DL_F32936F9C N 0.855
GRMZM2G472671 Zea mays GRMZM2G472671 N 0.855
GRMZM2G013688 Zea mays GRMZM2G013688 I 0.879
GRMZM2G038479 Zea mays GRMZM2G038479 I 0.879
GRMZM2G107560 Zea mays GRMZM2G107560 I 0.879