Pavir.J29021 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.J29021 T050925_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYC2
M01699_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8083 		0.826 1.000
PK18474.1
M01127_2.00 		Cannabis sativa
NRCACGTGCN
NGCACGTGYN		 PBM
Lambert et al.(2019)
pTH10273 		0.826 1.000
PK18474.1
M01768_2.00 		Cannabis sativa
NCACGWK
MWCGTGN		 PBM
Weirauch et al.(2014)
pTH9589 		0.826 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J29021.1.p bHLH 404 441

Links

Other bHLH family TFs
Other Panicum virgatum TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACLA_021680 Aspergillus clavatus CADACLAG00003021 N 0.000
AFUA_1G13750 Aspergillus fumigatus CADAFUAG00007079 N 0.000
CADANGAG00007007 Aspergillus niger CADANGAG00007007 N 0.000
ATEG_00582 Aspergillus terreus CADATEAG00007537 N 0.000
BDDG_02980 Blastomyces dermatitidis BDDG_02980 N 0.000
PVAR5_5233 Byssochlamys spectabilis PVAR5_5233 N 0.000
PV04_08090 Capronia semiimmersa PV04_08090 N 0.000
Z519_01293 Cladophialophora bantiana Z519_01293 N 0.000
G647_02466 Cladophialophora carrionii G647_02466 N 0.000
PV07_11807 Cladophialophora immunda PV07_11807 N 0.000
A1O5_02185 Cladophialophora psammophila A1O5_02185 N 0.000
A1O7_07617 Cladophialophora yegresii A1O7_07617 N 0.000
CIMG_03383 Coccidioides immitis CIMG_03383 N 0.000
CPC735_008270 Coccidioides posadasii CPC735_008270 N 0.000
HMPREF1541_03127 Cyphellophora europaea HMPREF1541_03127 N 0.000
EPUS_00094 Endocarpon pusillum EPUS_00094 N 0.000
A1O9_02587 Exophiala aquamarina A1O9_02587 N 0.000
PV10_02629 Exophiala mesophila PV10_02629 N 0.000
PV06_02231 Exophiala oligosperma PV06_02231 N 0.000
PV11_07301 Exophiala sideris PV11_07301 N 0.000
PV08_11535 Exophiala spinifera PV08_11535 N 0.000
PV05_09041 Exophiala xenobiotica PV05_09041 N 0.000
Z517_03216 Fonsecaea pedrosoi Z517_03216 N 0.000
HCBG_03883 Histoplasma capsulatum HCBG_03883 N 0.000
NFIA_011750 Neosartorya fischeri CADNFIAG00000778 N 0.000
OIDMADRAFT_81970 Oidiodendron maius OIDMADRAFT_81970 N 0.000
PABG_02440 Paracoccidioides brasiliensis PABG_02440 N 0.000
PAAG_12332 Paracoccidioides sp lutzii PAAG_12332 N 0.000
PMAA_067070 Penicillium marneffei PMAA_067070 N 0.000
PDE_00230 Penicillium oxalicum PDE_00230 N 0.000
Z518_06914 Rhinocladiella mackenziei Z518_06914 N 0.000
SBOR_9986 Sclerotinia borealis SBOR_9986 N 0.000
PMAA_067070 Talaromyces marneffei PMAA_067070 N 0.000
TSTA_087090 Talaromyces stipitatus TSTA_087090 N 0.000