Pavir.J34678 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.J34678 T050935_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J34678.1.p bHLH 79 130

Links

Other bHLH family TFs
Other Panicum virgatum TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_31340 Aegilops tauschii F775_31340 N 0.884
BRADI3G14590 Brachypodium distachyon BRADI3G14590 N 0.871
MLOC_6315 Hordeum vulgare MLOC_6315 N 0.884
LPERR08G02470 Leersia perrieri LPERR08G02470 N 0.871
OB08G12550 Oryza brachyantha OB08G12550 N 0.870
ORGLA08G0018000 Oryza glaberrima ORGLA08G0018000 N 0.870
OGLUM08G02420 Oryza glumaepatula OGLUM08G02420 N 0.870
BGIOSGA027691 Oryza indica BGIOSGA027691 N 0.870
OLONG_003616 Oryza longistaminata OLONG_003616 N 0.870
ONIVA08G02550 Oryza nivara ONIVA08G02550 N 0.870
OPUNC08G02220 Oryza punctata OPUNC08G02220 N 0.870
ORUFI08G02650 Oryza rufipogon ORUFI08G02650 N 0.870
OS08G0138500 Oryza sativa OS08G0138500 N 0.870
Pavir.J05070 Panicum virgatum Pavir.J05070 N 0.884
Pavir.Fb00223 Panicum virgatum Pavir.Fb00223 N 0.884
Pavir.Fa02284 Panicum virgatum Pavir.Fa02284 N 0.884
Si014339m.g Setaria italica Si014339m.g N 0.884
Sb07g002900 Sorghum bicolor Sb07g002900 N 0.860
Traes_7BL_6324A95B5 Triticum aestivum Traes_7BL_6324A95B5 N 0.884
Traes_7DL_88B60203A Triticum aestivum Traes_7DL_88B60203A N 0.884
Traes_7AL_B9345EB83 Triticum aestivum Traes_7AL_B9345EB83 N 0.884
TRIUR3_32784 Triticum urartu TRIUR3_32784 N 0.884
GRMZM2G093744 Zea mays GRMZM2G093744 N 0.860
GRMZM2G017586 Zea mays GRMZM2G017586 N 0.860