SMU15010696 (Schmidtea mediterranea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 SMU15010696 T051687_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arnt
M01719_2.00 		Mus musculus
NNKCACGTGMNN
NNKCACGTGMNN		 PBM
Weirauch et al.(2014)
pTH5111 		0.889 0.870
tgo
M06005_2.00 		Drosophila melanogaster
RDDTCGTGAYY
RRTCACGAHHY		 B1H
Zhu et al.(2011)
dys_tgo_SANGER_5_FBgn0015014 		0.889 0.870
tgo
M06006_2.00 		Drosophila melanogaster
SDTTGCGTGAC
GTCACGCAAHS		 B1H
Zhu et al.(2011)
ss_tgo_SANGER_10_FBgn0015014 		0.889 0.870
tgo
M06007_2.00 		Drosophila melanogaster
KCACGTGAC
GTCACGTGM		 B1H
Zhu et al.(2011)
tgo_cyc_SANGER_5_FBgn0015014 		0.889 0.870
tgo
M06008_2.00 		Drosophila melanogaster
RTACGTGAC
GTCACGTAY		 B1H
Zhu et al.(2011)
tgo_sima_SANGER_5_FBgn0015014 		0.889 0.870
tgo
M06009_2.00 		Drosophila melanogaster
VWACGTGACY
RGTCACGTWB		 B1H
Zhu et al.(2011)
tgo_sim_SANGER_5_FBgn0015014 		0.889 0.870
tgo
M06010_2.00 		Drosophila melanogaster
TGCGTGAC
GTCACGCA		 B1H
Zhu et al.(2011)
tgo_ss_SANGER_5_FBgn0015014 		0.889 0.870
tgo
M06011_2.00 		Drosophila melanogaster
RCACGTGAC
GTCACGTGY		 B1H
Zhu et al.(2011)
tgo_tai_SANGER_5_FBgn0015014 		0.889 0.870
tgo
M06012_2.00 		Drosophila melanogaster
VTACGTGACB
VGTCACGTAB		 B1H
Zhu et al.(2011)
tgo_trh_SANGER_5_FBgn0015014 		0.889 0.870
ARNT
M08732_2.00 		Homo sapiens
NKRCGTGMN
NKCACGYMN		 Misc
Kulakovskiy et al.(2013)
ARNT_HUMAN.H11MO.0.B 		0.889 0.870
ARNT
M09459_2.00 		Homo sapiens
KCACGTNN
NNACGTGM		 Misc
Heinz et al.(2010)
T47D-HIF1b_GSE59937 		0.889 0.870
ARNT
M09863_2.00 		Homo sapiens
NVNNNCACGTGNHHHN
NDDDNCACGTGNNNBN		 Transfac
Matys et al.(2006)
V$ARNT_01 		0.889 0.870
ARNT
M09864_2.00 		Homo sapiens
VVNNNRKCACGTGMYNNNBB
VVNNNRKCACGTGMYNNNBB		 Transfac
Matys et al.(2006)
V$ARNT_02 		0.889 0.870
ARNT
M09865_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARNT_Q6_01 		0.889 0.870
ARNT
M09866_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARNT_Q6 		0.889 0.870
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15010696 bHLH 48 101

Links

Other bHLH family TFs
Other Schmidtea mediterranea TFs

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G52000 Brachypodium distachyon BRADI1G52000 N
MLOC_19134 Hordeum vulgare MLOC_19134 N
LPERR06G00460 Leersia perrieri LPERR06G00460 N
LPERR10G12990 Leersia perrieri LPERR10G12990 N
OBART03G25130 Oryza barthii OBART03G25130 N
OBART10G17010 Oryza barthii OBART10G17010 N
OB06G10550 Oryza brachyantha OB06G10550 N
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N
ORGLA06G0005000 Oryza glaberrima ORGLA06G0005000 N
OGLUM06G00440 Oryza glumaepatula OGLUM06G00440 N
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N
BGIOSGA022090 Oryza indica BGIOSGA022090 N
BGIOSGA031489 Oryza indica BGIOSGA031489 N
BGIOSGA022089 Oryza indica BGIOSGA022089 N
OMERI10G13480 Oryza meridionalis OMERI10G13480 N
OMERI06G00450 Oryza meridionalis OMERI06G00450 N
ONIVA06G00500 Oryza nivara ONIVA06G00500 N
ONIVA10G18740 Oryza nivara ONIVA10G18740 N
OPUNC06G00440 Oryza punctata OPUNC06G00440 N
OPUNC10G16940 Oryza punctata OPUNC10G16940 N
ORUFI06G00530 Oryza rufipogon ORUFI06G00530 N
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N
OS10G0537100 Oryza sativa OS10G0537100 N
Pavir.Da02442 Panicum virgatum Pavir.Da02442 N
Si008509m.g Setaria italica Si008509m.g N
Si039972m.g Setaria italica Si039972m.g N
Sb10g000780 Sorghum bicolor Sb10g000780 N
Traes_4AL_445A910EB Triticum aestivum Traes_4AL_445A910EB N
GRMZM2G405170 Zea mays GRMZM2G405170 N
GRMZM2G027253 Zea mays GRMZM2G027253 N