neurod1.L (Xenopus laevis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 XB-GENE-6252655 T051847_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEUROD1
M04148_2.00 		Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY		 SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX 		0.894 0.962
NEUROD1
M08057_2.00 		Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN		 ChIP-seq
Mathelier et al.(2014)
MA1109.1 		0.894 0.962
NEUROD1
M08735_2.00 		Homo sapiens
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A 		0.894 0.962
Neurod1
M08764_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A 		0.894 0.962
Neurod1
M09474_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298 		0.894 0.962
NEUROD1
M09873_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_01 		0.894 0.962
NEUROD1
M09874_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_02 		0.894 0.962
NEUROD1
M04149_2.00 		Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY		 SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX 		0.894 0.962
NEUROD2
M02795_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Jolma et al.(2013)
NEUROD2_1 		0.859 0.923
NEUROD2
M04160_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX 		0.859 0.923
NEUROD2
M08737_2.00 		Homo sapiens
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B 		0.859 0.923
Neurod2
M08770_2.00 		Mus musculus
RVCAGATGGB
VCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A 		0.859 0.923
NEUROD2
M04161_2.00 		Homo sapiens
RMCATATGBY
RVCATATGKY		 SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX 		0.859 0.923
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAC59675 bHLH 103 155

Links

Other bHLH family TFs
Other Xenopus laevis TFs

270 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M378DRAFT_463994 Amanita muscaria M378DRAFT_463994 I 0.000
BAUCODRAFT_37166 Baudoinia compniacensis BAUCODRAFT_37166 I 0.000
CHGG_04697 Chaetomium globosum CHGG_04697 I 0.000
DOTSEDRAFT_161080 Dothistroma septosporum DOTSEDRAFT_161080 I 0.000
FOXG_17571 Fusarium oxysporum FOXG_17571 N 0.000
GGTG_02836 Gaeumannomyces graminis GGTG_02836 I 0.000
GALMADRAFT_244440 Galerina marginata GALMADRAFT_244440 N 0.000
GLOTRDRAFT_78300 Gloeophyllum trabeum GLOTRDRAFT_78300 N 0.000
CMQ_4894 Grosmannia clavigera CMQ_4894 N 0.000
M413DRAFT_29155 Hebeloma cylindrosporum M413DRAFT_29155 N 0.000
MPH_12582 Macrophomina phaseolina MPH_12582 I 0.000
MGG_12339 Magnaporthe oryzae MGG_12339 I 0.000
MAPG_00999 Magnaporthe poae MAPG_00999 I 0.000
Moror_12870 Moniliophthora roreri Moror_12870 N 0.000
MYCTH_2298970 Myceliophthora thermophila MYCTH_2298970 I 0.000
e_gw1.7.93.1 Mycosphaerella fijiensis e_gw1.7.93.1 I 0.000
e_gw1.5.1618.1 Mycosphaerella graminicola e_gw1.5.1618.1 I 0.000
UCRNP2_10087 Neofusicoccum parvum UCRNP2_10087 I 0.000
NCU07675 Neurospora crassa NCU07675 D 0.000
estExt_Genewise1Plus.C_31316 Neurospora discreta estExt_Genewise1Plus.C_31316 I 0.000
NEUTE1DRAFT_60106 Neurospora tetrasperma NEUTE1DRAFT_60106 I 0.000
PFICI_04665 Pestalotiopsis fici PFICI_04665 I 0.000
PILCRDRAFT_401124 Piloderma croceum PILCRDRAFT_401124 N 0.000
PILCRDRAFT_819471 Piloderma croceum PILCRDRAFT_819471 N 0.000
PLICRDRAFT_45259 Plicaturopsis crispa PLICRDRAFT_45259 N 0.000
MYCFIDRAFT_34745 Pseudocercospora fijiensis MYCFIDRAFT_34745 I 0.000
SMAC_00876 Sordaria macrospora SMAC_00876 I 0.000
SPBR_00126 Sporothrix brasiliensis SPBR_00126 N 0.000
HMPREF1624_05867 Sporothrix schenckii HMPREF1624_05867 N 0.000
TRIVIDRAFT_221632 Trichoderma virens TRIVIDRAFT_221632 I 0.000
PV09_03219 Verruconis gallopava PV09_03219 I 0.000
Mycgr3G41440 Zymoseptoria tritici Mycgr3G41440 I 0.000