CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSFALG00000006030
(
Ficedula albicollis
)
bHLH,T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
PF00907 (T-box)
IPR001092
IPR001699
ENSFALG00000006030
T055455_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MGA
M02821_2.00
Homo sapiens
RGGTGTGA
TCACACCY
SELEX
Jolma et al.(2013)
MGA_1
0.906
0.906
MGA
M02822_2.00
Homo sapiens
AGGTGTKAHDTMACACCT
AGGTGTKAHDTMACACCT
SELEX
Jolma et al.(2013)
MGA_2
0.906
0.906
MGA
M02823_2.00
Homo sapiens
VGTGTKAWWWTTCACRCB
VGYGTGAAWWWTMACACB
SELEX
Jolma et al.(2013)
MGA_3
0.906
0.906
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFALP00000006295
T-box
78
261
VTLDNNSMWNEFYHRNTEMILTKQGRRMFPYCRYWITGLNSSQKYILVMDISPVDNHRYKWNGRWWEPSGKAEPHVLGRVFIHPESPSTGQFWMHQPVSFYKLKLTNNTLDQEGHIILHSMHRYLPRLHLVPANKATEVIQLNGPDVHTFTFPQTEFFAVTAYQNIQITQLKIDYNPFAKGFRD
ENSFALP00000006295
bHLH
2417
2468
YRQTHTANERRRRNEMRGLFDKLKKALGLLNLPKVSKCYILKQAFEEIQGLT
Links
Other
bHLH,T-box
family TFs
Other
Ficedula albicollis
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy