CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
maker-nMf.1.1.scaf07513-snap-gene-0.5
(
Meloidogyne floridensis
)
Brinker
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF09607 (BrkDBD)
IPR018586
maker-nMf.1.1.scaf07513-snap-gene-0.5
T055897_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf07513-snap-gene-0.5-mRNA-1
Brinker
129
182
VRRLSYPREFKLIVLHSYWTNGKNKYRTCKEFHITKSMLNGWLQKAEKIRNSRP
Links
Other
Brinker
family TFs
Other
Meloidogyne floridensis
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NFX1
Callithrix jacchus
ENSCJAG00000008142
N
NFX1
Erinaceus europaeus
ENSEEUG00000001694
N
NFX1
Microcebus murinus
ENSMICG00000012124
N
NFX1
Ochotona princeps
ENSOPRG00000009816
N
NFX1
Procavia capensis
ENSPCAG00000006913
N
ENSTSYG00000004125
Tarsius syrichta
ENSTSYG00000004125
N