AMTR_s00031p00017860 (Amborella trichopoda)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 AMTR_s00031p00017860 T056751_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA6
M01780_2.00 		Arabidopsis thaliana
NNTGACGTMA
TKACGTCANN		 PBM
Weirauch et al.(2014)
pTH8691 		0.791 0.860
TGA6
M01055_2.00 		Arabidopsis thaliana
NNVTGACGTMN
NKACGTCABNN		 PBM
Sullivan et al.(2014)
pTH8858 		0.791 0.860
PK09021.1
M01155_2.00 		Cannabis sativa
NNTGACGTMA
TKACGTCANN		 PBM
Lambert et al.(2019)
pTH10175 		0.791 0.860
TGA6
M06773_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDNN
NNHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA6_col_a 		0.791 0.860
TGA6
M06774_2.00 		Arabidopsis thaliana
NRTGACGTCAKCDNN
NNHGMTGACGTCAYN		 Dap-seq
OMalley et al.(2016)
TGA6_colamp_a 		0.791 0.860
TGA2
M01784_2.00 		Arabidopsis thaliana
NNACGTCABN
NVTGACGTNN		 PBM
Weirauch et al.(2014)
pTH8820 		0.791 0.840
TGA2
M00856_2.00 		Arabidopsis thaliana
NVTGACGTMN
NKACGTCABN		 PBM
Franco-Zorrilla et al.(2014)
TGA2 		0.791 0.840
TGA5
M01785_2.00 		Arabidopsis thaliana
VTGACGTN
NACGTCAB		 PBM
Weirauch et al.(2014)
pTH8180 		0.791 0.840
TGA2
M06785_2.00 		Arabidopsis thaliana
YNMCGYCABCD
HGVTGRCGKNR		 Dap-seq
OMalley et al.(2016)
TGA2_colamp_v31 		0.791 0.840
TGA2
M06786_2.00 		Arabidopsis thaliana
NNNNNDNHGMTGACGTCAYH
DRTGACGTCAKCDNHNNNNN		 Dap-seq
OMalley et al.(2016)
TGA2_col 		0.791 0.840
TGA5
M06787_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA5_col_v3a 		0.791 0.840
TGA2
M09917_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA2_01 		0.791 0.840
TGA2
M09918_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA2_Q2 		0.791 0.840
HBP1B_WHEAT
M10043_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HBP1B_Q6 		0.791 0.820
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN16483 bZIP 187 236

Links

Other bZIP family TFs
Other Amborella trichopoda TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AATE012494 Anopheles atroparvus AATE012494 N
ASIS023085 Anopheles sinensis ASIS023085 N
BGLB002935 Biomphalaria glabrata BGLB002935 N
SP4 Choloepus hoffmanni ENSCHOG00000007448 N
CpipJ_CPIJ005175 Culex pipiens CpipJ_CPIJ005175 N
CPIJ005175 Culex quinquefasciatus CPIJ005175 N
SP4 Dasypus novemcinctus ENSDNOG00000014491 N
GD16964 Drosophila simulans FBgn0188542 N
ENSLACG00000008022 Latimeria chalumnae ENSLACG00000008022 N
ENSMEUG00000002260 Macropus eugenii ENSMEUG00000002260 N
SP4 Procavia capensis ENSPCAG00000016506 N
ENSTNIG00000002389 Tetraodon nigroviridis ENSTNIG00000002389 N
ENSXMAG00000013916 Xiphophorus maculatus ENSXMAG00000013916 N