CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CEBPE
(
Bos taurus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSBTAG00000005952
T059065_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CEBPE
M02824_2.00
Homo sapiens
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPE_1
0.899
0.968
CEBPE
M02729_2.00
Homo sapiens
VTTDYRHAAY
RTTDYRHAAB
SELEX
Jolma et al.(2010)
CEBPE_dimer
0.899
0.968
CEBPE
M04227_2.00
Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN
SELEX
Yin et al.(2017)
CEBPE_eDBD_HT-SELEX
0.899
0.968
CEBPE
M04009_2.00
Homo sapiens
NVTKRYRCAABN
NVTTGYRYMABN
SELEX
Rodriguez-Martinez et al.(2017)
CEBPE.1
0.899
0.968
CEBPE
M08783_2.00
Homo sapiens
VHDATTDCVHAM
KTDBGHAATHDB
Misc
Kulakovskiy et al.(2013)
CEBPE_HUMAN.H11MO.0.A
0.899
0.968
CEBPE
M09927_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPE_01
0.899
0.968
CEBPE
M09928_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPE_Q6_01
0.899
0.968
CEBPE
M09929_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPE_Q6
0.899
0.968
CEBPE
M04228_2.00
Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN
SELEX
Yin et al.(2017)
CEBPE_eDBD_Methyl-HT-SELEX
0.899
0.968
Cebpe
M01815_2.00
Mus musculus
TKDYGCAA
TTGCRHMA
PBM
Weirauch et al.(2014)
pTH5253
0.898
0.952
Cebpe
M08836_2.00
Mus musculus
VHDATTDCVHAM
KTDBGHAATHDB
Misc
Kulakovskiy et al.(2013)
CEBPE_MOUSE.H11MO.0.A
0.898
0.952
CEBPB
M02851_2.00
Homo sapiens
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPB_1
0.824
0.730
CEBPB
M02852_2.00
Homo sapiens
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPB_2
0.824
0.730
CEBPB
M04331_2.00
Homo sapiens
NVTTRCGCAAYN
NRTTGCGYAABN
SELEX
Yin et al.(2017)
CEBPB_eDBD_HT-SELEX
0.824
0.730
CEBPB
M05840_2.00
Homo sapiens
RTTRCGYAAYM
KRTTRCGYAAY
SMiLE-seq
Isakova et al.(2017)
CEBPb
0.824
0.730
CEBPB
M07830_2.00
Homo sapiens
NNDRTKDYGCAAYN
NRTTGCRHMAYHNN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_CEBPB_Stanford
0.824
0.730
CEBPB
M07831_2.00
Homo sapiens
RTKRYGCAAYV
BRTTGCRYMAY
ChIP-seq
Gerstein et al.(2012)
HepG2_CEBPB_Stanford
0.824
0.730
CEBPB
M07832_2.00
Homo sapiens
DRTKRYGCAAYVNN
NNBRTTGCRYMAYH
ChIP-seq
Gerstein et al.(2012)
K562_CEBPB_Stanford
0.824
0.730
CEBPB
M08804_2.00
Homo sapiens
DRTKDHGCAAYV
BRTTGCDHMAYH
Misc
Kulakovskiy et al.(2013)
CEBPB_HUMAN.H11MO.0.A
0.824
0.730
CEBPB
M09993_2.00
Homo sapiens
RNRTKDDGHAAKNN
NNMTTDCHHMAYNY
Transfac
Matys et al.(2006)
V$CEBPB_01
0.824
0.730
CEBPB
M09994_2.00
Homo sapiens
NDRTKDHGCAABMH
DKVTTGCDHMAYHN
Transfac
Matys et al.(2006)
V$CEBPB_02
0.824
0.730
CEBPB
M09995_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_04
0.824
0.730
CEBPB
M09996_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_07
0.824
0.730
CEBPB
M09997_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_Q3
0.824
0.730
CEBPB
M09998_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_Q6
0.824
0.730
CEBPB
M04332_2.00
Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN
SELEX
Yin et al.(2017)
CEBPB_eDBD_Methyl-HT-SELEX
0.824
0.730
Cebpb
M02636_2.00
Mus musculus
VTKDYGYAAB
VTTRCRHMAB
PBM
Tillo et al.(2017)
CEBPB_C
0.815
0.714
Cebpb
M00999_2.00
Mus musculus
VTKDYGYAAB
VTTRCRHMAB
PBM
Mann et al.(2013)
CEBPB_UM_HK
0.815
0.714
Cebpb
M00761_2.00
Mus musculus
NTKDHGHAAB
VTTDCDHMAN
PBM
Weirauch et al.(2013)
pTH3208
0.815
0.714
Cebpb
M01818_2.00
Mus musculus
VTKDYGYAAB
VTTRCRHMAB
PBM
Weirauch et al.(2014)
pTH5460
0.815
0.714
Cebpb
M02867_2.00
Mus musculus
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
Cebpb_1
0.815
0.714
Cebpb
M08841_2.00
Mus musculus
DRTKDHGCAAB
VTTGCDHMAYH
Misc
Kulakovskiy et al.(2013)
CEBPB_MOUSE.H11MO.0.A
0.815
0.714
Cebpb
M09498_2.00
Mus musculus
GTTGYRCAAT
ATTGYRCAAC
Misc
Heinz et al.(2010)
ThioMac-CEBPb_GSE21512
0.815
0.714
Cebpb
M02633_2.00
Mus musculus
VTKDNGHAAB
VTTDCNHMAB
PBM
Tillo et al.(2017)
CEBPB_5hmC
0.815
0.714
Cebpb
M02634_2.00
Mus musculus
TKDYGYAAYN
NRTTRCRHMA
PBM
Tillo et al.(2017)
CEBPB_5mCG
0.815
0.714
Cebpb
M02635_2.00
Mus musculus
YKDYGHAAYN
NRTTDCRHMR
PBM
Tillo et al.(2017)
CEBPB_5mC
0.815
0.714
Cebpb
M00998_2.00
Mus musculus
NTTDCGCAA
TTGCGHAAN
PBM
Mann et al.(2013)
CEBPB_M_HK
0.815
0.714
Cebpa
M00994_2.00
Mus musculus
TTDCGCAA
TTGCGHAA
PBM
Mann et al.(2013)
CEBPA_UM_HK
0.793
0.714
Cebpa
M01811_2.00
Mus musculus
VTKDYRHMAB
VTKDYRHMAB
PBM
Weirauch et al.(2014)
pTH5166
0.793
0.714
CEBPA
M04045_2.00
Homo sapiens
NVTKRCGCAABN
NVTTGCGYMABN
SELEX
Rodriguez-Martinez et al.(2017)
CEBPA.1
0.793
0.714
CEBPA
M08076_2.00
Homo sapiens
DRTTDTGCAAY
RTTGCAHAAYH
ChIP-seq
Mathelier et al.(2014)
MA0102.3
0.793
0.714
CEBPA
M08813_2.00
Homo sapiens
NVTKKWGCAABN
NVTTGCWMMABN
Misc
Kulakovskiy et al.(2013)
CEBPA_HUMAN.H11MO.0.A
0.793
0.714
Cebpa
M08830_2.00
Mus musculus
DVTKDNGCAAB
VTTGCNHMABH
Misc
Kulakovskiy et al.(2013)
CEBPA_MOUSE.H11MO.0.A
0.793
0.714
CEBPA
M10023_2.00
Homo sapiens
NNNWHWVCAMWBN
NVWKTGBWDWNNN
Transfac
Matys et al.(2006)
V$CEBP_01
0.793
0.714
CEBPA
M10024_2.00
Homo sapiens
NNNTKDNSYAAHNN
NNDTTRSNHMANNN
Transfac
Matys et al.(2006)
V$CEBPA_01
0.793
0.714
CEBPA
M10025_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPA_04
0.793
0.714
CEBPA
M10026_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPA_Q4
0.793
0.714
CEBPA
M10027_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPA_Q6
0.793
0.714
CEBPA
M10028_2.00
Homo sapiens
NGWVTKHBGYAAKVBAYD
HRTVBMTTRCVDMABWCN
Transfac
Matys et al.(2006)
V$CEBP_C
0.793
0.714
CEBPA
M10029_2.00
Homo sapiens
NNNTKDHSCAANNN
NNNTTGSDHMANNN
Transfac
Matys et al.(2006)
V$CEBP_Q2
0.793
0.714
Cebpa
M00993_2.00
Mus musculus
NTTDCGCAA
TTGCGHAAN
PBM
Mann et al.(2013)
CEBPA_M_HK
0.793
0.714
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000007811
bZIP
203
265
DSLEYRLRRERNNIAVRKSRDKAKRRILETQQKVLEYMTENERLRNRVEQLTQELDTLRNLFR
Links
Other
bZIP
family TFs
Other
Bos taurus
TFs
133 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pm.C_scaffold_9000158
Phytophthora capsici
fgenesh1_pm.C_scaffold_9000158
N
0.000
PITG_21561
Phytophthora infestans
PITG_21561
N
0.000
fgenesh_scip_prom.28083.2088
Phytophthora lateralis
fgenesh_scip_prom.28083.2088
N
0.000
F443_16836
Phytophthora parasitica
F443_16836
N
0.000
Phyra84533
Phytophthora ramorum
Phyra84533
N
0.000
Physo142761
Phytophthora sojae
Physo142761
N
0.000
maker-pag1_scaffold_131-snap-gene-0.18
Pythium aphanidermatum
maker-pag1_scaffold_131-snap-gene-0.18
N
0.000
maker-pag1_scaffold_131-snap-gene-0.19
Pythium aphanidermatum
maker-pag1_scaffold_131-snap-gene-0.19
N
0.000
fgenesh_masked-piw_contig_1181-abinit-gene-0.13
Pythium iwayamai
fgenesh_masked-piw_contig_1181-abinit-gene-0.13
N
0.000