CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSFALG00000012404
(
Ficedula albicollis
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSFALG00000012404
T059663_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Batf3
M08826_2.00
Mus musculus
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN
Misc
Kulakovskiy et al.(2013)
BATF3_MOUSE.H11MO.0.A
0.843
0.828
Batf
M08829_2.00
Mus musculus
NWSASTCAWHNNDDDANH
DNTHHHNNDWTGASTSWN
Misc
Kulakovskiy et al.(2013)
BATF_MOUSE.H11MO.0.A
0.824
0.578
Batf
M09495_2.00
Mus musculus
VTGASTCABH
DVTGASTCAB
Misc
Heinz et al.(2010)
Th17-BATF_GSE39756
0.824
0.578
BATF3
M02833_2.00
Homo sapiens
YGATGACGTCATCA
TGATGACGTCATCR
SELEX
Jolma et al.(2013)
BATF3_1
0.823
0.891
BATF3
M04268_2.00
Homo sapiens
BRTGACGTCABN
NVTGACGTCAYV
SELEX
Yin et al.(2017)
BATF3_eDBD_HT-SELEX
0.823
0.891
BATF3
M04270_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
BATF3_FL_HT-SELEX
0.823
0.891
BATF3
M04025_2.00
Homo sapiens
GRTGACGTCAYC
GRTGACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
BATF3.1
0.823
0.891
BATF3
M04026_2.00
Homo sapiens
GRTGACGTGGS
SCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
BATF3.2
0.823
0.891
BATF3
M08794_2.00
Homo sapiens
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN
Misc
Kulakovskiy et al.(2013)
BATF3_HUMAN.H11MO.0.B
0.823
0.891
BATF3
M09962_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF3_02
0.823
0.891
BATF3
M04269_2.00
Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN
SELEX
Yin et al.(2017)
BATF3_eDBD_Methyl-HT-SELEX
0.823
0.891
BATF3
M04271_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
BATF3_FL_Methyl-HT-SELEX
0.823
0.891
BATF
M04307_2.00
Homo sapiens
NVVYGMCACN
NGTGKCRBBN
SELEX
Yin et al.(2017)
BATF_FL_HT-SELEX
0.813
0.562
BATF
M07821_2.00
Homo sapiens
TBASTCAWWNYDRRA
TYYHRNWWTGASTVA
ChIP-seq
Gerstein et al.(2012)
GM12878_BATF_HudsonAlpha
0.813
0.562
BATF
M08799_2.00
Homo sapiens
NWBASTCAWWHHRRRAVH
DBTYYYDDWWTGASTVWN
Misc
Kulakovskiy et al.(2013)
BATF_HUMAN.H11MO.0.A
0.813
0.562
BATF
M09971_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF_01
0.813
0.562
BATF
M09972_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF_02
0.813
0.562
BATF
M09973_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF_03
0.813
0.562
BATF
M09974_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF_04
0.813
0.562
BATF
M04308_2.00
Homo sapiens
NVVYGACACN
NGTGTCRBBN
SELEX
Yin et al.(2017)
BATF_FL_Methyl-HT-SELEX
0.813
0.562
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFALP00000012949
bZIP
44
107
EEDDRKVRRREKNRVAAQRSRKKQTQKADKLHEEYESLEQENTSLKREIGKLTDEMKHLSEVLK
Links
Other
bZIP
family TFs
Other
Ficedula albicollis
TFs
120 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_027820
Acremonium chrysogenum
ACRE_027820
N
AOL_s00054g391
Arthrobotrys oligospora
AOL_s00054g391
N
BBA_05381
Beauveria bassiana
BBA_05381
N
Bcin11g00690
Botrytis cinerea
Bcin11g00690
N
CFIO01_08107
Colletotrichum fioriniae
CFIO01_08107
N
GLRG_08850
Colletotrichum graminicola
GLRG_08850
N
Cob_07699
Colletotrichum orbiculare
Cob_07699
N
CSUB01_05147
Colletotrichum sublineola
CSUB01_05147
N
CCM_04601
Cordyceps militaris
CCM_04601
N
H072_779
Dactylellina haptotyla
H072_779
N
EV44_g5282
Erysiphe necator
EV44_g5282
N
FFUJ_06082
Fusarium fujikuroi
FFUJ_06082
N
FGRRES_08431
Fusarium graminearum
FGRRES_08431
N
FOXG_03227
Fusarium oxysporum
FOXG_03227
N
FPSE_05040
Fusarium pseudograminearum
FPSE_05040
N
NechaG91927
Fusarium solani
NechaG91927
N
GGTG_01655
Gaeumannomyces graminis
GGTG_01655
N
MGG_08875
Magnaporthe oryzae
MGG_08875
N
MBM_05874
Marssonina brunnea
MBM_05874
N
MANI_028549
Metarhizium anisopliae
MANI_028549
N
MAJ_00099
Metarhizium majus
MAJ_00099
N
X797_000578
Metarhizium robertsii
X797_000578
N
fgenesh1_pm.sca_2_chr3_3_0000327
Nectria haematococca
fgenesh1_pm.sca_2_chr3_3_0000327
N
NCU04773
Neurospora crassa
NCU04773
N
estExt_Genewise1Plus.C_60317
Neurospora discreta
estExt_Genewise1Plus.C_60317
N
NEUTE1DRAFT_87140
Neurospora tetrasperma
NEUTE1DRAFT_87140
N
F503_08558
Ophiostoma piceae uamh
F503_08558
N
PFICI_03093
Pestalotiopsis fici
PFICI_03093
N
PODANS_4_8950
Podospora anserina
PODANS_4_8950
N
GMDG_05689
Pseudogymnoascus destructans
GMDG_05689
N
V499_05253
Pseudogymnoascus pannorum
V499_05253
N
SMAC_03408
Sordaria macrospora
SMAC_03408
N
S40288_06430
Stachybotrys chartarum
S40288_06430
N
S40285_04802
Stachybotrys chlorohalonata
S40285_04802
N
VHEMI06811
Torrubiella hemipterigena
VHEMI06811
N
TRIATDRAFT_223478
Trichoderma atroviride
TRIATDRAFT_223478
N
TRIREDRAFT_122767
Trichoderma reesei
TRIREDRAFT_122767
N
TRIVIDRAFT_67483
Trichoderma virens
TRIVIDRAFT_67483
N
PV09_05386
Verruconis gallopava
PV09_05386
N
VDBG_08112
Verticillium albo atrum
VDBG_08112
N
VDBG_08112
Verticillium alfalfae
VDBG_08112
N
VDAG_01608
Verticillium dahliae
VDAG_01608
N