CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGMOG00000018033
(
Gadus morhua
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSGMOG00000018033
T059971_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATF6B
M04375_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_1
0.822
0.594
ATF6B
M04376_2.00
Homo sapiens
NRTGACGTGGCR
YGCCACGTCAYN
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_2
0.822
0.594
ATF6B
M04377_2.00
Homo sapiens
TGCCACGTGGCR
YGCCACGTGGCA
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_3
0.822
0.594
ATF6B
M04041_2.00
Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.1
0.822
0.594
ATF6B
M04042_2.00
Homo sapiens
YGMCACGTGKCR
YGMCACGTGKCR
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.2
0.822
0.594
ATF6B
M04043_2.00
Homo sapiens
RTGACGTCAYC
GRTGACGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.3
0.822
0.594
ATF6B
M04044_2.00
Homo sapiens
MCCACGATGT
ACATCGTGGK
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.4
0.822
0.594
ATF6B
M04378_2.00
Homo sapiens
SRTGACGTCAYB
VRTGACGTCAYS
SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_1
0.822
0.594
ATF6B
M04379_2.00
Homo sapiens
BRTGACGTGGCR
YGCCACGTCAYV
SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_2
0.822
0.594
ATF6
M04254_2.00
Homo sapiens
YKRTGACGTGGCAN
NTGCCACGTCAYMR
SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_1
0.816
0.703
ATF6
M04255_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_2
0.816
0.703
ATF6
M04018_2.00
Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.1
0.816
0.703
ATF6
M04019_2.00
Homo sapiens
KAGTCACGTGK
MCACGTGACTM
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.2
0.816
0.703
ATF6
M04020_2.00
Homo sapiens
BNRTGACGTCATCA
TGATGACGTCAYNV
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.3
0.816
0.703
ATF6
M04021_2.00
Homo sapiens
ACCACGATGTY
RACATCGTGGT
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.4
0.816
0.703
ATF6
M08790_2.00
Homo sapiens
VBSSTGACGTGG
CCACGTCASSVB
Misc
Kulakovskiy et al.(2013)
ATF6A_HUMAN.H11MO.0.B
0.816
0.703
ATF6
M09947_2.00
Homo sapiens
TGACGTGG
CCACGTCA
Transfac
Matys et al.(2006)
V$ATF6_01
0.816
0.703
ATF6
M04256_2.00
Homo sapiens
YGRTGACGTGGCRN
NYGCCACGTCAYCR
SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_1
0.816
0.703
ATF6
M04257_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_2
0.816
0.703
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGMOP00000019410
bZIP
244
307
SKVGQRQQRMIKNRESASLSRKKKKEYLQTLEARLKMALSENEVLKNENGHLKKQLDGLLTENT
Links
Other
bZIP
family TFs
Other
Gadus morhua
TFs
106 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000003728
Ailuropoda melanoleuca
ENSAMEG00000003728
N
L3MBTL1
Anolis carolinensis
ENSACAG00000002143
N
AMEM007577
Anopheles merus
AMEM007577
N
ENSAMXG00000008822
Astyanax mexicanus
ENSAMXG00000008822
N
estExt_fgenesh2_pg.C_5980016
Branchiostoma floridae
estExt_fgenesh2_pg.C_5980016
N
L3MBTL1
Callithrix jacchus
ENSCJAG00000003964
N
MYT1L
Callithrix jacchus
ENSCJAG00000007286
N
L3MBTL1
Canis familiaris
ENSCAFG00000009291
N
ENSCSAG00000014035
Chlorocebus sabaeus
ENSCSAG00000014035
N
L3MBTL1
Choloepus hoffmanni
ENSCHOG00000005052
N
CGI_10022678
Crassostrea gigas
CGI_10022678
N
l3mbtl1a
Danio rerio
ENSDARG00000014828
N
L3mbtl1
Dipodomys ordii
ENSDORG00000002707
N
ENSETEG00000013916
Echinops telfairi
ENSETEG00000013916
N
L3MBTL1
Equus caballus
ENSECAG00000008175
N
L3MBTL1
Erinaceus europaeus
ENSEEUG00000006232
N
ENSGMOG00000006059
Gadus morhua
ENSGMOG00000006059
N
ENSGACG00000006074
Gasterosteus aculeatus
ENSGACG00000006074
N
L3MBTL1
Gorilla gorilla
ENSGGOG00000034980
N
L3MBTL1
Homo sapiens
ENSG00000185513
N
ENSSTOG00000011672
Ictidomys tridecemlineatus
ENSSTOG00000011672
N
ENSP00000362227
Macaca fascicularis
ENSP00000362227
N
L3MBTL1
Microcebus murinus
ENSMICG00000015115
N
L3MBTL1
Monodelphis domestica
ENSMODG00000003647
N
ENSMPUG00000017691
Mustela putorius furo
ENSMPUG00000017691
N
L3mbtl1
Mus musculus
ENSMUSG00000035576
N
Myotis_brandtii_L3MBTL1_10025184
Myotis brandtii
Myotis_brandtii_L3MBTL1_10025184
N
ENSMLUG00000016624
Myotis lucifugus
ENSMLUG00000016624
N
ENSNLEG00000006529
Nomascus leucogenys
ENSNLEG00000006529
N
L3MBTL1
Ochotona princeps
ENSOPRG00000002367
N
Ogr13959
Ophisaurus gracilis
Ogr13959
N
ENSONIG00000001923
Oreochromis niloticus
ENSONIG00000001923
N
L3MBTL1
Ornithorhynchus anatinus
ENSOANG00000014344
N
L3MBTL1
Oryctolagus cuniculus
ENSOCUG00000006662
N
ENSORLG00000003513
Oryzias latipes
ENSORLG00000003513
N
L3MBTL1
Otolemur garnettii
ENSOGAG00000014470
N
ENSOARG00000003176
Ovis aries
ENSOARG00000003176
N
L3MBTL1
Pan troglodytes
ENSPTRG00000013507
N
ENSPANG00000026135
Papio anubis
ENSPANG00000026135
N
ENSPSIG00000016444
Pelodiscus sinensis
ENSPSIG00000016444
N
PPAI004584
Phlebotomus papatasi
PPAI004584
N
ENSPFOG00000022630
Poecilia formosa
ENSPFOG00000022630
N
L3MBTL1
Procavia capensis
ENSPCAG00000013248
N
L3MBTL1
Pteropus vampyrus
ENSPVAG00000015234
N
L3mbtl1
Rattus norvegicus
ENSRNOG00000007044
N
ENSSSCG00000007365
Sus scrofa
ENSSSCG00000007365
N
ENSTSYG00000014180
Tarsius syrichta
ENSTSYG00000014180
N
ENSTNIG00000012014
Tetraodon nigroviridis
ENSTNIG00000012014
N
L3MBTL1
Tursiops truncatus
ENSTTRG00000012844
N
l3mbtl1
Xenopus tropicalis
XB-GENE-949999
N
ENSXMAG00000019188
Xiphophorus maculatus
ENSXMAG00000019188
N