ATF6B (Loxodonta africana)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSLAFG00000020739 T060062_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATF6B
M04375_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_1 		0.871 0.953
ATF6B
M04376_2.00 		Homo sapiens
NRTGACGTGGCR
YGCCACGTCAYN		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_2 		0.871 0.953
ATF6B
M04377_2.00 		Homo sapiens
TGCCACGTGGCR
YGCCACGTGGCA		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_3 		0.871 0.953
ATF6B
M04041_2.00 		Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.1 		0.871 0.953
ATF6B
M04042_2.00 		Homo sapiens
YGMCACGTGKCR
YGMCACGTGKCR		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.2 		0.871 0.953
ATF6B
M04043_2.00 		Homo sapiens
RTGACGTCAYC
GRTGACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.3 		0.871 0.953
ATF6B
M04044_2.00 		Homo sapiens
MCCACGATGT
ACATCGTGGK		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.4 		0.871 0.953
ATF6B
M04378_2.00 		Homo sapiens
SRTGACGTCAYB
VRTGACGTCAYS		 SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_1 		0.871 0.953
ATF6B
M04379_2.00 		Homo sapiens
BRTGACGTGGCR
YGCCACGTCAYV		 SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_2 		0.871 0.953
ATF6
M04254_2.00 		Homo sapiens
YKRTGACGTGGCAN
NTGCCACGTCAYMR		 SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_1 		0.820 0.641
ATF6
M04255_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_2 		0.820 0.641
ATF6
M04018_2.00 		Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.1 		0.820 0.641
ATF6
M04019_2.00 		Homo sapiens
KAGTCACGTGK
MCACGTGACTM		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.2 		0.820 0.641
ATF6
M04020_2.00 		Homo sapiens
BNRTGACGTCATCA
TGATGACGTCAYNV		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.3 		0.820 0.641
ATF6
M04021_2.00 		Homo sapiens
ACCACGATGTY
RACATCGTGGT		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.4 		0.820 0.641
ATF6
M08790_2.00 		Homo sapiens
VBSSTGACGTGG
CCACGTCASSVB		 Misc
Kulakovskiy et al.(2013)
ATF6A_HUMAN.H11MO.0.B 		0.820 0.641
ATF6
M09947_2.00 		Homo sapiens
TGACGTGG
CCACGTCA		 Transfac
Matys et al.(2006)
V$ATF6_01 		0.820 0.641
ATF6
M04256_2.00 		Homo sapiens
YGRTGACGTGGCRN
NYGCCACGTCAYCR		 SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_1 		0.820 0.641
ATF6
M04257_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_2 		0.820 0.641
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000016231 bZIP 320 383

Links

Other bZIP family TFs
Other Loxodonta africana TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000016370 Astyanax mexicanus ENSAMXG00000016370 I 0.000
ENSAMXG00000003452 Astyanax mexicanus ENSAMXG00000003452 I 0.000
ENSP00000268638-D1 Bos grunniens ENSP00000268638-D1 I 0.000
IRF8 Bos taurus ENSBTAG00000017824 I 0.000
ENSCSAG00000003142 Chlorocebus sabaeus ENSCSAG00000003142 I 0.000
irf8 Danio rerio ENSDARG00000056407 I 0.000
IRF8 Erinaceus europaeus ENSEEUG00000002644 I 0.000
IRF4 Erinaceus europaeus ENSEEUG00000007703 I 0.000
irf4b Gasterosteus aculeatus ENSGACG00000004966 I 0.000
irf4a Gasterosteus aculeatus ENSGACG00000016461 I 0.000
IRF8 Gorilla gorilla ENSGGOG00000028251 I 0.000
IRF8 Homo sapiens ENSG00000140968 D 0.000
ENSLACG00000007228 Latimeria chalumnae ENSLACG00000007228 I 0.000
ENSLOCG00000003532 Lepisosteus oculatus ENSLOCG00000003532 I 0.000
ENSP00000268638 Macaca fascicularis ENSP00000268638 I 0.000
IRF8 Macaca mulatta ENSMMUG00000008125 I 0.000
IRF8 Meleagris gallopavo ENSMGAG00000007344 N 0.000
ENSMPUG00000008641 Mustela putorius furo ENSMPUG00000008641 I 0.000
Irf4 Mus musculus ENSMUSG00000021356 D 0.000
Irf8 Mus musculus ENSMUSG00000041515 D 0.000
Myotis_brandtii_Irf4_10020370 Myotis brandtii Myotis_brandtii_Irf4_10020370 I 0.000
ENSNLEG00000011429 Nomascus leucogenys ENSNLEG00000011429 I 0.000
IRF8 Ochotona princeps ENSOPRG00000002139 I 0.000
Ogr05775 Ophisaurus gracilis Ogr05775 I 0.000
IRF8 Ornithorhynchus anatinus ENSOANG00000003741 I 0.000
irf4a Oryzias latipes ENSORLG00000017242 I 0.000
irf8 Oryzias latipes ENSORLG00000018216 I 0.000
irf4b Oryzias latipes ENSORLG00000012712 I 0.000
IRF8 Otolemur garnettii ENSOGAG00000009262 I 0.000
ENSOARG00000011513 Ovis aries ENSOARG00000011513 I 0.000
IRF8 Pan troglodytes ENSPTRG00000008435 I 0.000
ENSPANG00000024770 Papio anubis ENSPANG00000024770 I 0.000
ENSPFOG00000015506 Poecilia formosa ENSPFOG00000015506 I 0.000
ENSPFOG00000017639 Poecilia formosa ENSPFOG00000017639 I 0.000
ENSPPYG00000007620 Pongo abelii ENSPPYG00000007620 I 0.000
IRF8 Procavia capensis ENSPCAG00000004460 I 0.000
IRF4 Procavia capensis ENSPCAG00000010586 I 0.000
Irf4 Rattus norvegicus ENSRNOG00000061070 I 0.000
Irf8 Rattus norvegicus ENSRNOG00000017869 I 0.000
ENSSSCG00000023184 Sus scrofa ENSSSCG00000023184 I 0.000
irf4b Takifugu rubripes ENSTRUG00000002946 I 0.000
irf8 Takifugu rubripes ENSTRUG00000018213 I 0.000
irf8 Tetraodon nigroviridis ENSTNIG00000009283 I 0.000
irf4a Tetraodon nigroviridis ENSTNIG00000005370 I 0.000
IRF8 Vicugna pacos ENSVPAG00000006643 I 0.000
irf8.L Xenopus laevis XB-GENE-985949 I 0.000
irf10 Xenopus tropicalis XB-GENE-1033046 I 0.000
ENSXMAG00000017015 Xiphophorus maculatus ENSXMAG00000017015 I 0.000