CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ATF6B
(
Myotis lucifugus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSMLUG00000026641
T060283_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATF6B
M04375_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_1
0.854
0.969
ATF6B
M04376_2.00
Homo sapiens
NRTGACGTGGCR
YGCCACGTCAYN
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_2
0.854
0.969
ATF6B
M04377_2.00
Homo sapiens
TGCCACGTGGCR
YGCCACGTGGCA
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_3
0.854
0.969
ATF6B
M04041_2.00
Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.1
0.854
0.969
ATF6B
M04042_2.00
Homo sapiens
YGMCACGTGKCR
YGMCACGTGKCR
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.2
0.854
0.969
ATF6B
M04043_2.00
Homo sapiens
RTGACGTCAYC
GRTGACGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.3
0.854
0.969
ATF6B
M04044_2.00
Homo sapiens
MCCACGATGT
ACATCGTGGK
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.4
0.854
0.969
ATF6B
M04378_2.00
Homo sapiens
SRTGACGTCAYB
VRTGACGTCAYS
SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_1
0.854
0.969
ATF6B
M04379_2.00
Homo sapiens
BRTGACGTGGCR
YGCCACGTCAYV
SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_2
0.854
0.969
ATF6
M04254_2.00
Homo sapiens
YKRTGACGTGGCAN
NTGCCACGTCAYMR
SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_1
0.814
0.625
ATF6
M04255_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_2
0.814
0.625
ATF6
M04018_2.00
Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.1
0.814
0.625
ATF6
M04019_2.00
Homo sapiens
KAGTCACGTGK
MCACGTGACTM
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.2
0.814
0.625
ATF6
M04020_2.00
Homo sapiens
BNRTGACGTCATCA
TGATGACGTCAYNV
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.3
0.814
0.625
ATF6
M04021_2.00
Homo sapiens
ACCACGATGTY
RACATCGTGGT
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.4
0.814
0.625
ATF6
M08790_2.00
Homo sapiens
VBSSTGACGTGG
CCACGTCASSVB
Misc
Kulakovskiy et al.(2013)
ATF6A_HUMAN.H11MO.0.B
0.814
0.625
ATF6
M09947_2.00
Homo sapiens
TGACGTGG
CCACGTCA
Transfac
Matys et al.(2006)
V$ATF6_01
0.814
0.625
ATF6
M04256_2.00
Homo sapiens
YGRTGACGTGGCRN
NYGCCACGTCAYCR
SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_1
0.814
0.625
ATF6
M04257_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_2
0.814
0.625
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000018820
bZIP
273
340
AKLLKRQQRMIKNRESACQSRRKKKEYLQGLEARLQAVLADNQQLRRENAALRRRLEALWTENSELKL
Links
Other
bZIP
family TFs
Other
Myotis lucifugus
TFs
109 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M378DRAFT_401669
Amanita muscaria
M378DRAFT_401669
N
BOTBODRAFT_182178
Botryobasidium botryosum
BOTBODRAFT_182178
N
BOTBODRAFT_25595
Botryobasidium botryosum
BOTBODRAFT_25595
N
CERSUDRAFT_114621
Ceriporiopsis subvermispora
CERSUDRAFT_114621
N
DICSQDRAFT_182637
Dichomitus squalens
DICSQDRAFT_182637
N
FIBRA_08357
Fibroporia radiculosa
FIBRA_08357
N
FOMPIDRAFT_1089631
Fomitopsis pinicola
FOMPIDRAFT_1089631
N
FOMPIDRAFT_1134751
Fomitopsis pinicola
FOMPIDRAFT_1134751
N
GALMADRAFT_248753
Galerina marginata
GALMADRAFT_248753
N
GLOTRDRAFT_127510
Gloeophyllum trabeum
GLOTRDRAFT_127510
N
GLOTRDRAFT_141479
Gloeophyllum trabeum
GLOTRDRAFT_141479
N
M413DRAFT_172756
Hebeloma cylindrosporum
M413DRAFT_172756
N
fgenesh3_kg.3__397__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA
Heterobasidion annosum
fgenesh3_kg.3__397__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA
N
fgenesh3_kg.27__1__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA
Heterobasidion annosum
fgenesh3_kg.27__1__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA
N
fgenesh3_kg.15__30__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA
Heterobasidion annosum
fgenesh3_kg.15__30__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA
N
fgenesh3_kg.15__10__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA
Heterobasidion annosum
fgenesh3_kg.15__10__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA
N
HETIRDRAFT_412619
Heterobasidion irregulare
HETIRDRAFT_412619
N
HETIRDRAFT_144838
Heterobasidion irregulare
HETIRDRAFT_144838
N
HETIRDRAFT_440636
Heterobasidion irregulare
HETIRDRAFT_440636
N
HYDPIDRAFT_42253
Hydnomerulius pinastri
HYDPIDRAFT_42253
N
JAAARDRAFT_37116
Jaapia argillacea
JAAARDRAFT_37116
N
JAAARDRAFT_40854
Jaapia argillacea
JAAARDRAFT_40854
N
K443DRAFT_92166
Laccaria amethystina
K443DRAFT_92166
N
K443DRAFT_676663
Laccaria amethystina
K443DRAFT_676663
N
K443DRAFT_107454
Laccaria amethystina
K443DRAFT_107454
N
LACBIDRAFT_299937
Laccaria bicolor
LACBIDRAFT_299937
N
LACBIDRAFT_303095
Laccaria bicolor
LACBIDRAFT_303095
N
LACBIDRAFT_303137
Laccaria bicolor
LACBIDRAFT_303137
N
LACBIDRAFT_303218
Laccaria bicolor
LACBIDRAFT_303218
N
LACBIDRAFT_304198
Laccaria bicolor
LACBIDRAFT_304198
N
LACBIDRAFT_313619
Laccaria bicolor
LACBIDRAFT_313619
N
Moror_495
Moniliophthora roreri
Moror_495
N
PAXRUDRAFT_825895
Paxillus rubicundulus
PAXRUDRAFT_825895
N
PAXRUDRAFT_567209
Paxillus rubicundulus
PAXRUDRAFT_567209
N
PILCRDRAFT_823959
Piloderma croceum
PILCRDRAFT_823959
N
PISMIDRAFT_16314
Pisolithus microcarpus
PISMIDRAFT_16314
N
PISMIDRAFT_679110
Pisolithus microcarpus
PISMIDRAFT_679110
N
M404DRAFT_997965
Pisolithus tinctorius
M404DRAFT_997965
N
PLEOSDRAFT_1095820
Pleurotus ostreatus
PLEOSDRAFT_1095820
N
PLICRDRAFT_180699
Plicaturopsis crispa
PLICRDRAFT_180699
N
PLICRDRAFT_58528
Plicaturopsis crispa
PLICRDRAFT_58528
N
POSPLDRAFT_101465
Postia placenta
POSPLDRAFT_101465
N
POSPLDRAFT_100640
Postia placenta
POSPLDRAFT_100640
N
V565_052720
Rhizoctonia solani
V565_052720
N
SCHCODRAFT_257926
Schizophyllum commune
SCHCODRAFT_257926
N
SCLCIDRAFT_106570
Scleroderma citrinum
SCLCIDRAFT_106570
N
SCLCIDRAFT_1208064
Scleroderma citrinum
SCLCIDRAFT_1208064
N
CY34DRAFT_729847
Suillus luteus
CY34DRAFT_729847
N
CY34DRAFT_26021
Suillus luteus
CY34DRAFT_26021
N
BN946_scf184969.g70
Trametes cinnabarina
BN946_scf184969.g70
N