ATF3 (Sus scrofa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSSSCG00000015595 T061431_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Atf3
M00758_2.00 		Mus musculus
NNRTKAYNN
NNRTMAYNN		 PBM
Weirauch et al.(2013)
pTH2684 		0.929 0.984
ATF3
M04321_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF3_eDBD_HT-SELEX 		0.823 1.000
Atf3
M01807_2.00 		Mus musculus
GATGACGY
RCGTCATC		 PBM
Weirauch et al.(2014)
pTH5018 		0.929 0.984
ATF3
M04323_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF3_FL_HT-SELEX 		0.823 1.000
Atf3
M08825_2.00 		Mus musculus
VTGACTCAB
VTGAGTCAB		 Misc
Kulakovskiy et al.(2013)
ATF3_MOUSE.H11MO.0.A 		0.929 0.984
ATF3
M04032_2.00 		Homo sapiens
RTGACGTCAK
MTGACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF3.1 		0.823 1.000
JDP2
M02836_2.00 		Homo sapiens
ATGASTCAT
ATGASTCAT		 SELEX
Jolma et al.(2013)
JDP2_1 		0.881 0.742
ATF3
M04033_2.00 		Homo sapiens
RTGACTCAY
RTGAGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF3.2 		0.823 1.000
JDP2
M02837_2.00 		Homo sapiens
NRTGACGTCATB
VATGACGTCAYN		 SELEX
Jolma et al.(2013)
JDP2_2 		0.881 0.742
ATF3
M07822_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
GM12878_ATF3_HudsonAlpha 		0.823 1.000
JDP2
M02838_2.00 		Homo sapiens
ATGASTCAT
ATGASTCAT		 SELEX
Jolma et al.(2013)
JDP2_3 		0.881 0.742
ATF3
M07823_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_ATF3_HudsonAlpha 		0.823 1.000
JDP2
M02839_2.00 		Homo sapiens
NRTGACGTCATN
NATGACGTCAYN		 SELEX
Jolma et al.(2013)
JDP2_4 		0.881 0.742
ATF3
M07824_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
HepG2_ATF3_HudsonAlpha 		0.823 1.000
JDP2
M04285_2.00 		Homo sapiens
NATGASTCATV
BATGASTCATN		 SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_1 		0.881 0.742
ATF3
M07825_2.00 		Homo sapiens
VRTSACGTVR
YBACGTSAYB		 ChIP-seq
Gerstein et al.(2012)
K562_ATF3_Harvard 		0.823 1.000
JDP2
M04286_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_2 		0.881 0.742
ATF3
M08187_2.00 		Homo sapiens
GTCACGTG
CACGTGAC		 ChIP-seq
Contrino et al.(2012)
Mv41 		0.823 1.000
JDP2
M04289_2.00 		Homo sapiens
NRTGMSKCAYN
NRTGMSKCAYN		 SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_1 		0.881 0.742
ATF3
M08188_2.00 		Homo sapiens
NRTGASTCAY
RTGASTCAYN		 ChIP-seq
Contrino et al.(2012)
Mv43 		0.823 1.000
JDP2
M04290_2.00 		Homo sapiens
NRTKACRTMAYN
NRTKAYGTMAYN		 SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_2 		0.881 0.742
ATF3
M08801_2.00 		Homo sapiens
RRTSACGTVRB
VYBACGTSAYY		 Misc
Kulakovskiy et al.(2013)
ATF3_HUMAN.H11MO.0.A 		0.823 1.000
JDP2
M04287_2.00 		Homo sapiens
BATGASTCAYN
NRTGASTCATV		 SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_1 		0.881 0.742
ATF3
M09489_2.00 		Homo sapiens
NVTGASTCABNN
NNVTGASTCABN		 Misc
Heinz et al.(2010)
GBM-ATF3_GSE33912 		0.823 1.000
JDP2
M04288_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_2 		0.881 0.742
ATF3
M09977_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_02 		0.823 1.000
JDP2
M04291_2.00 		Homo sapiens
NRTGASTCAYN
NRTGASTCAYN		 SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_1 		0.881 0.742
ATF3
M09978_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_05 		0.823 1.000
JDP2
M04292_2.00 		Homo sapiens
NVTKACRTCAYN
NRTGAYGTMABN		 SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_2 		0.881 0.742
ATF3
M09979_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6_01 		0.823 1.000
Jdp2
M00125_2.00 		Mus musculus
NRTGAYDNNN
NNNHRTCAYN		 PBM
Badis et al.(2009)
Jundm2_0911 		0.879 0.742
ATF3
M09980_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6_02 		0.823 1.000
Jdp2
M01810_2.00 		Mus musculus
NNTGACGYMW
WKRCGTCANN		 PBM
Weirauch et al.(2014)
pTH5464 		0.879 0.742
ATF3
M09981_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6 		0.823 1.000
Jdp2
M02861_2.00 		Mus musculus
ATGASTCAT
ATGASTCAT		 SELEX
Jolma et al.(2013)
Jdp2_1 		0.879 0.742
ATF3
M04322_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
ATF3_eDBD_Methyl-HT-SELEX 		0.823 1.000
Jdp2
M02862_2.00 		Mus musculus
VATGACGTCAYN
NRTGACGTCATB		 SELEX
Jolma et al.(2013)
Jdp2_2 		0.879 0.742
ATF3
M04324_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
ATF3_FL_Methyl-HT-SELEX 		0.823 1.000
Jdp2
M10033_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$JDP2_03 		0.879 0.742
Atf3
M03648_2.00 		Drosophila melanogaster
NRTKACGTMAYN
NRTKACGTMAYN		 SELEX
Nitta et al.(2015)
Atf3_1 		0.789 0.565
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000016534 bZIP 84 145
ENSSSCP00000028528 bZIP 55 87
ENSSSCP00000028980 bZIP 27 89

Links

Other bZIP family TFs
Other Sus scrofa TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB07764.1 Alternaria brassicicola AB07764.1 N
AB05056.1 Alternaria brassicicola AB05056.1 N
e_gw1.00009.84.1 Aspergillus carbonarius e_gw1.00009.84.1 N
ACLA_050890 Aspergillus clavatus CADACLAG00004878 N
CADAFLAG00002161 Aspergillus flavus CADAFLAG00002161 N
AFUA_4G11850 Aspergillus fumigatus CADAFUAG00008171 N
ANIA_05533 Aspergillus nidulans CADANIAG00003549 N
M437DRAFT_77772 Aureobasidium melanogenum M437DRAFT_77772 N
M438DRAFT_349770 Aureobasidium pullulans M438DRAFT_349770 N
AUEXF2481DRAFT_152 Aureobasidium subglaciale AUEXF2481DRAFT_152 N
BAUCODRAFT_118634 Baudoinia compniacensis BAUCODRAFT_118634 I
COCC4DRAFT_137441 Bipolaris maydis COCC4DRAFT_137441 N
COCC4DRAFT_160626 Bipolaris maydis COCC4DRAFT_160626 N
COCMIDRAFT_6100 Bipolaris oryzae COCMIDRAFT_6100 N
COCMIDRAFT_94153 Bipolaris oryzae COCMIDRAFT_94153 N
COCSADRAFT_229975 Bipolaris sorokiniana COCSADRAFT_229975 N
COCSADRAFT_324435 Bipolaris sorokiniana COCSADRAFT_324435 N
COCVIDRAFT_27743 Bipolaris victoriae COCVIDRAFT_27743 N
COCVIDRAFT_95708 Bipolaris victoriae COCVIDRAFT_95708 N
COCCADRAFT_105405 Bipolaris zeicola COCCADRAFT_105405 N
COCCADRAFT_7354 Bipolaris zeicola COCCADRAFT_7354 N
BGHDH14_bgh04332 Blumeria graminis BGHDH14_bgh04332 N
Bcin04g01240 Botrytis cinerea Bcin04g01240 I
Bcin11g04510 Botrytis cinerea Bcin11g04510 N
PVAR5_3215 Byssochlamys spectabilis PVAR5_3215 I
CPUR_07267 Claviceps purpurea CPUR_07267 N
CIMG_01608 Coccidioides immitis CIMG_01608 N
CPC735_048660 Coccidioides posadasii CPC735_048660 N
e_gw1.9.820.1 Cochliobolus heterostrophus C5 e_gw1.9.820.1 N
CGGC5_7996 Colletotrichum gloeosporioides CGGC5_7996 N
GLRG_10847 Colletotrichum graminicola GLRG_10847 N
CH063_00504 Colletotrichum higginsianum CH063_00504 N
Cob_05618 Colletotrichum orbiculare Cob_05618 N
CSUB01_03005 Colletotrichum sublineola CSUB01_03005 N
W97_00715 Coniosporium apollinis W97_00715 N
H072_9722 Dactylellina haptotyla H072_9722 N
DOTSEDRAFT_68927 Dothistroma septosporum DOTSEDRAFT_68927 N
DRE_02202 Drechslerella stenobrocha DRE_02202 I
EV44_g1635 Erysiphe necator EV44_g1635 N
HMPREF1120_08148 Exophiala dermatitidis HMPREF1120_08148 I
FOMPIDRAFT_1024907 Fomitopsis pinicola FOMPIDRAFT_1024907 I
FFUJ_06813 Fusarium fujikuroi FFUJ_06813 N
NechaG30529 Fusarium solani NechaG30529 N
GGTG_09987 Gaeumannomyces graminis GGTG_09987 N
LEMA_P055840.1 Leptosphaeria maculans LEMA_P055840.1 N
MPH_05214 Macrophomina phaseolina MPH_05214 N
MGG_05153 Magnaporthe oryzae MGG_05153 I
MGG_08753 Magnaporthe oryzae MGG_08753 N
MBM_05784 Marssonina brunnea MBM_05784 N
MAJ_08454 Metarhizium majus MAJ_08454 N
X797_004155 Metarhizium robertsii X797_004155 N
MYCTH_2299657 Myceliophthora thermophila MYCTH_2299657 N
fgenesh1_pg.C_scaffold_1000879 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_1000879 N
e_gw1.1.1647.1 Nectria haematococca e_gw1.1.1647.1 N
UCRNP2_5943 Neofusicoccum parvum UCRNP2_5943 N
NFIA_104380 Neosartorya fischeri CADNFIAG00009977 N
NCU05294 Neurospora crassa NCU05294 D
estExt_Genewise1.C_31830 Neurospora discreta estExt_Genewise1.C_31830 N
estExt_Genewise1.C_120294 Neurospora discreta estExt_Genewise1.C_120294 I
NEUTE1DRAFT_78259 Neurospora tetrasperma NEUTE1DRAFT_78259 N
NEUTE1DRAFT_121594 Neurospora tetrasperma NEUTE1DRAFT_121594 I
OIDMADRAFT_122144 Oidiodendron maius OIDMADRAFT_122144 N
OCS_01600 Ophiocordyceps sinensis OCS_01600 I
Pc22g04960 Penicillium chrysogenum Pc22g04960 N
PDIP_42870 Penicillium digitatum PDIP_42870 N
PEX1_006710 Penicillium expansum PEX1_006710 N
PITC_093240 Penicillium italicum PITC_093240 N
PMAA_041870 Penicillium marneffei PMAA_041870 I
PDE_08558 Penicillium oxalicum PDE_08558 I
PCH_Pc22g04960 Penicillium rubens PCH_Pc22g04960 N
U727_00433920131 Penicillium solitum U727_00433920131 N
PFICI_15376 Pestalotiopsis fici PFICI_15376 N
SNOG_06887 Phaeosphaeria nodorum SNOG_06887 N
MYCFIDRAFT_76004 Pseudocercospora fijiensis MYCFIDRAFT_76004 N
GMDG_00534 Pseudogymnoascus destructans GMDG_00534 N
V499_04709 Pseudogymnoascus pannorum V499_04709 N
PTT_18058 Pyrenophora teres PTT_18058 N
PTRG_00667 Pyrenophora triticirepentis PTRG_00667 N
PTRG_06548 Pyrenophora triticirepentis PTRG_06548 N
SETTUDRAFT_165742 Setosphaeria turcica SETTUDRAFT_165742 N
SETTUDRAFT_160687 Setosphaeria turcica SETTUDRAFT_160687 N
SMAC_03029 Sordaria macrospora SMAC_03029 N
SMAC_01696 Sordaria macrospora SMAC_01696 I
SEPMUDRAFT_146288 Sphaerulina musiva SEPMUDRAFT_146288 N
SNOG_06887 Stagonospora nodorum SNOG_06887 N
PMAA_041870 Talaromyces marneffei PMAA_041870 I
TSTA_076120 Talaromyces stipitatus TSTA_076120 I
THITE_2116108 Thielavia terrestris THITE_2116108 N
THITE_2115656 Thielavia terrestris THITE_2115656 I
VHEMI02684 Torrubiella hemipterigena VHEMI02684 N
VHEMI01402 Torrubiella hemipterigena VHEMI01402 N
TRIREDRAFT_55274 Trichoderma reesei TRIREDRAFT_55274 I
PV09_02355 Verruconis gallopava PV09_02355 N
VDAG_08992 Verticillium dahliae VDAG_08992 I