atf6 (Takifugu rubripes)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSTRUG00000006660 T061655_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATF6B
M04375_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_1 		0.823 0.594
ATF6B
M04376_2.00 		Homo sapiens
NRTGACGTGGCR
YGCCACGTCAYN		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_2 		0.823 0.594
ATF6B
M04377_2.00 		Homo sapiens
TGCCACGTGGCR
YGCCACGTGGCA		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_3 		0.823 0.594
ATF6B
M04041_2.00 		Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.1 		0.823 0.594
ATF6B
M04042_2.00 		Homo sapiens
YGMCACGTGKCR
YGMCACGTGKCR		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.2 		0.823 0.594
ATF6B
M04043_2.00 		Homo sapiens
RTGACGTCAYC
GRTGACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.3 		0.823 0.594
ATF6B
M04044_2.00 		Homo sapiens
MCCACGATGT
ACATCGTGGK		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.4 		0.823 0.594
ATF6B
M04378_2.00 		Homo sapiens
SRTGACGTCAYB
VRTGACGTCAYS		 SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_1 		0.823 0.594
ATF6B
M04379_2.00 		Homo sapiens
BRTGACGTGGCR
YGCCACGTCAYV		 SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_2 		0.823 0.594
ATF6
M04254_2.00 		Homo sapiens
YKRTGACGTGGCAN
NTGCCACGTCAYMR		 SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_1 		0.818 0.703
ATF6
M04255_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_2 		0.818 0.703
ATF6
M04018_2.00 		Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.1 		0.818 0.703
ATF6
M04019_2.00 		Homo sapiens
KAGTCACGTGK
MCACGTGACTM		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.2 		0.818 0.703
ATF6
M04020_2.00 		Homo sapiens
BNRTGACGTCATCA
TGATGACGTCAYNV		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.3 		0.818 0.703
ATF6
M04021_2.00 		Homo sapiens
ACCACGATGTY
RACATCGTGGT		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.4 		0.818 0.703
ATF6
M08790_2.00 		Homo sapiens
VBSSTGACGTGG
CCACGTCASSVB		 Misc
Kulakovskiy et al.(2013)
ATF6A_HUMAN.H11MO.0.B 		0.818 0.703
ATF6
M09947_2.00 		Homo sapiens
TGACGTGG
CCACGTCA		 Transfac
Matys et al.(2006)
V$ATF6_01 		0.818 0.703
ATF6
M04256_2.00 		Homo sapiens
YGRTGACGTGGCRN
NYGCCACGTCAYCR		 SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_1 		0.818 0.703
ATF6
M04257_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_2 		0.818 0.703
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000016370 bZIP 1 64
ENSTRUP00000016371 bZIP 260 323
ENSTRUP00000016372 bZIP 261 324
ENSTRUP00000016373 bZIP 267 330
ENSTRUP00000016374 bZIP 116 179

Links

Other bZIP family TFs
Other Takifugu rubripes TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_054570 Acremonium chrysogenum ACRE_054570 N
Bcin02g08310 Botrytis cinerea Bcin02g08310 N
CFIO01_08071 Colletotrichum fioriniae CFIO01_08071 N
CGGC5_3607 Colletotrichum gloeosporioides CGGC5_3607 N
GLRG_06776 Colletotrichum graminicola GLRG_06776 N
CH063_08900 Colletotrichum higginsianum CH063_08900 N
Cob_05888 Colletotrichum orbiculare Cob_05888 N
CSUB01_01660 Colletotrichum sublineola CSUB01_01660 N
estExt_Genewise1.C_100108 Cryphonectria parasitica estExt_Genewise1.C_100108 N
UCREL1_9565 Eutypa lata UCREL1_9565 N
FFUJ_13620 Fusarium fujikuroi FFUJ_13620 N
FGRRES_06382 Fusarium graminearum FGRRES_06382 N
FPSE_05827 Fusarium pseudograminearum FPSE_05827 N
NechaG92421 Fusarium solani NechaG92421 N
GGTG_05245 Gaeumannomyces graminis GGTG_05245 N
MGG_09562 Magnaporthe oryzae MGG_09562 N
MAPG_03623 Magnaporthe poae MAPG_03623 N
X797_000968 Metarhizium robertsii X797_000968 N
fgenesh1_pm.sca_3_chr4_2_0000036 Nectria haematococca fgenesh1_pm.sca_3_chr4_2_0000036 N
NCU02386 Neurospora crassa NCU02386 N
OCS_00747 Ophiocordyceps sinensis OCS_00747 N
OCS_04593 Ophiocordyceps sinensis OCS_04593 N
PFICI_03549 Pestalotiopsis fici PFICI_03549 N
GMDG_04399 Pseudogymnoascus destructans GMDG_04399 N
V499_02769 Pseudogymnoascus pannorum V499_02769 N
SAPIO_CDS4519 Scedosporium apiospermum SAPIO_CDS4519 N
VHEMI08999 Torrubiella hemipterigena VHEMI08999 N
TRIATDRAFT_293053 Trichoderma atroviride TRIATDRAFT_293053 N
TRIREDRAFT_60897 Trichoderma reesei TRIREDRAFT_60897 N
TRIVIDRAFT_74205 Trichoderma virens TRIVIDRAFT_74205 N
PV09_03404 Verruconis gallopava PV09_03404 N
VDAG_09459 Verticillium dahliae VDAG_09459 N