CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_1g022495
(
Medicago truncatula
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
MTR_1g022495
T064942_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BZIP44
M06756_2.00
Arabidopsis thaliana
DWGMTGACGTGGC
GCCACGTCAKCWH
Dap-seq
OMalley et al.(2016)
bZIP44_colamp_a
0.816
0.629
BZIP44
M06757_2.00
Arabidopsis thaliana
DDWGMTGACGTGGCM
KGCCACGTCAKCWHH
Dap-seq
OMalley et al.(2016)
bZIP44_col
0.816
0.629
bZIP911
M02661_2.00
Antirrhinum majus
GRTGACGTGKMC
GKMCACGTCAYC
SELEX
Mathelier et al.(2014)
MA0097.1
0.787
0.516
bZIP911
M10064_2.00
Antirrhinum majus
GRTGACGTGGCC
GGCCACGTCAYC
Transfac
Matys et al.(2006)
P$BZIP911_01
0.787
0.516
bZIP911
M10065_2.00
Antirrhinum majus
GRTGACGTGTAC
GTACACGTCAYC
Transfac
Matys et al.(2006)
P$BZIP911_02
0.787
0.516
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH40186
bZIP
28
89
DQRKRKRKQSNRESARRSRMRKQKHMDDLIAEVERLRNENSEILTRMNMTTQHYLKIEAENC
Links
Other
bZIP
family TFs
Other
Medicago truncatula
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo4g151030
Brassica oleracea
Bo4g151030
I
Bo8g100870
Brassica oleracea
Bo8g100870
I
Bra030207
Brassica rapa
Bra030207
I
Bra039927
Brassica rapa
Bra039927
I
LPERR12G15010
Leersia perrieri
LPERR12G15010
N
OBART12G17960
Oryza barthii
OBART12G17960
N
OBART12G18000
Oryza barthii
OBART12G18000
N
OGLUM12G19530
Oryza glumaepatula
OGLUM12G19530
N
OGLUM12G19510
Oryza glumaepatula
OGLUM12G19510
N
OGLUM12G19500
Oryza glumaepatula
OGLUM12G19500
N
BGIOSGA037734
Oryza indica
BGIOSGA037734
N
BGIOSGA037732
Oryza indica
BGIOSGA037732
N
ONIVA12G16580
Oryza nivara
ONIVA12G16580
N
ONIVA12G16610
Oryza nivara
ONIVA12G16610
N
OPUNC12G16280
Oryza punctata
OPUNC12G16280
N
ORUFI12G19880
Oryza rufipogon
ORUFI12G19880
N
ORUFI12G19910
Oryza rufipogon
ORUFI12G19910
N
Si024602m.g
Setaria italica
Si024602m.g
N
Si024958m.g
Setaria italica
Si024958m.g
N
Sb08g020275
Sorghum bicolor
Sb08g020275
N
Sb08g020280
Sorghum bicolor
Sb08g020280
N
Sb08g020300
Sorghum bicolor
Sb08g020300
N
Sb08g020320
Sorghum bicolor
Sb08g020320
N
GRMZM2G165090
Zea mays
GRMZM2G165090
N
GRMZM2G018472
Zea mays
GRMZM2G018472
N