CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Afo_R004508 *(Aptenodytes forsteri)* bZIP
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00170 (bZIP_1)	IPR011616	Afo_R004508	T069803_2.00	GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
JDP2 M02836_2.00	Homo sapiens	ATGASTCAT	ATGASTCAT	SELEX Jolma et al.(2013) JDP2_1	0.945	0.984
JDP2 M02837_2.00	Homo sapiens	NRTGACGTCATB	VATGACGTCAYN	SELEX Jolma et al.(2013) JDP2_2	0.945	0.984
JDP2 M02838_2.00	Homo sapiens	ATGASTCAT	ATGASTCAT	SELEX Jolma et al.(2013) JDP2_3	0.945	0.984
JDP2 M02839_2.00	Homo sapiens	NRTGACGTCATN	NATGACGTCAYN	SELEX Jolma et al.(2013) JDP2_4	0.945	0.984
JDP2 M04285_2.00	Homo sapiens	NATGASTCATV	BATGASTCATN	SELEX Yin et al.(2017) JDP2_eDBD_HT-SELEX_1	0.945	0.984
JDP2 M04286_2.00	Homo sapiens	NRTGACGTCAYN	NRTGACGTCAYN	SELEX Yin et al.(2017) JDP2_eDBD_HT-SELEX_2	0.945	0.984
JDP2 M04289_2.00	Homo sapiens	NRTGMSKCAYN	NRTGMSKCAYN	SELEX Yin et al.(2017) JDP2_FL_HT-SELEX_1	0.945	0.984
JDP2 M04290_2.00	Homo sapiens	NRTKACRTMAYN	NRTKAYGTMAYN	SELEX Yin et al.(2017) JDP2_FL_HT-SELEX_2	0.945	0.984
JDP2 M04287_2.00	Homo sapiens	BATGASTCAYN	NRTGASTCATV	SELEX Yin et al.(2017) JDP2_eDBD_Methyl-HT-SELEX_1	0.945	0.984
JDP2 M04288_2.00	Homo sapiens	NRTGACRTCAYN	NRTGAYGTCAYN	SELEX Yin et al.(2017) JDP2_eDBD_Methyl-HT-SELEX_2	0.945	0.984
JDP2 M04291_2.00	Homo sapiens	NRTGASTCAYN	NRTGASTCAYN	SELEX Yin et al.(2017) JDP2_FL_Methyl-HT-SELEX_1	0.945	0.984
JDP2 M04292_2.00	Homo sapiens	NVTKACRTCAYN	NRTGAYGTMABN	SELEX Yin et al.(2017) JDP2_FL_Methyl-HT-SELEX_2	0.945	0.984
Jdp2 M00125_2.00	Mus musculus	NRTGAYDNNN	NNNHRTCAYN	PBM Badis et al.(2009) Jundm2_0911	0.941	0.969
Jdp2 M01810_2.00	Mus musculus	NNTGACGYMW	WKRCGTCANN	PBM Weirauch et al.(2014) pTH5464	0.941	0.969
Jdp2 M02861_2.00	Mus musculus	ATGASTCAT	ATGASTCAT	SELEX Jolma et al.(2013) Jdp2_1	0.941	0.969
Jdp2 M02862_2.00	Mus musculus	VATGACGTCAYN	NRTGACGTCATB	SELEX Jolma et al.(2013) Jdp2_2	0.941	0.969
Jdp2 M10033_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$JDP2_03	0.941	0.969
Atf3 M00758_2.00	Mus musculus	NNRTKAYNN	NNRTMAYNN	PBM Weirauch et al.(2013) pTH2684	0.881	0.719
Atf3 M01807_2.00	Mus musculus	GATGACGY	RCGTCATC	PBM Weirauch et al.(2014) pTH5018	0.881	0.719
Atf3 M08825_2.00	Mus musculus	VTGACTCAB	VTGAGTCAB	Misc Kulakovskiy et al.(2013) ATF3_MOUSE.H11MO.0.A	0.881	0.719
Atf3 M03648_2.00	Drosophila melanogaster	NRTKACGTMAYN	NRTKACGTMAYN	SELEX Nitta et al.(2015) Atf3_1	0.825	0.562
ATF3 M04321_2.00	Homo sapiens	NRTGACGTCAYN	NRTGACGTCAYN	SELEX Yin et al.(2017) ATF3_eDBD_HT-SELEX	0.786	0.391
ATF3 M04323_2.00	Homo sapiens	NRTGACGTCAYN	NRTGACGTCAYN	SELEX Yin et al.(2017) ATF3_FL_HT-SELEX	0.786	0.391
ATF3 M04032_2.00	Homo sapiens	RTGACGTCAK	MTGACGTCAY	SELEX Rodriguez-Martinez et al.(2017) ATF3.1	0.786	0.391
ATF3 M04033_2.00	Homo sapiens	RTGACTCAY	RTGAGTCAY	SELEX Rodriguez-Martinez et al.(2017) ATF3.2	0.786	0.391
ATF3 M07822_2.00	Homo sapiens	VGTCACGTGRB	VYCACGTGACB	ChIP-seq Gerstein et al.(2012) GM12878_ATF3_HudsonAlpha	0.786	0.391
ATF3 M07823_2.00	Homo sapiens	VGTCACGTGRB	VYCACGTGACB	ChIP-seq Gerstein et al.(2012) H1-hESC_ATF3_HudsonAlpha	0.786	0.391
ATF3 M07824_2.00	Homo sapiens	VGTCACGTGRB	VYCACGTGACB	ChIP-seq Gerstein et al.(2012) HepG2_ATF3_HudsonAlpha	0.786	0.391
ATF3 M07825_2.00	Homo sapiens	VRTSACGTVR	YBACGTSAYB	ChIP-seq Gerstein et al.(2012) K562_ATF3_Harvard	0.786	0.391
ATF3 M08187_2.00	Homo sapiens	GTCACGTG	CACGTGAC	ChIP-seq Contrino et al.(2012) Mv41	0.786	0.391
ATF3 M08188_2.00	Homo sapiens	NRTGASTCAY	RTGASTCAYN	ChIP-seq Contrino et al.(2012) Mv43	0.786	0.391
ATF3 M08801_2.00	Homo sapiens	RRTSACGTVRB	VYBACGTSAYY	Misc Kulakovskiy et al.(2013) ATF3_HUMAN.H11MO.0.A	0.786	0.391
ATF3 M09489_2.00	Homo sapiens	NVTGASTCABNN	NNVTGASTCABN	Misc Heinz et al.(2010) GBM-ATF3_GSE33912	0.786	0.391
ATF3 M09977_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ATF3_02	0.786	0.391
ATF3 M09978_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ATF3_05	0.786	0.391
ATF3 M09979_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ATF3_Q6_01	0.786	0.391
ATF3 M09980_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ATF3_Q6_02	0.786	0.391
ATF3 M09981_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ATF3_Q6	0.786	0.391
ATF3 M04322_2.00	Homo sapiens	NRTGACRTCAYH	DRTGAYGTCAYN	SELEX Yin et al.(2017) ATF3_eDBD_Methyl-HT-SELEX	0.786	0.391
ATF3 M04324_2.00	Homo sapiens	NRTGACRTCAYH	DRTGAYGTCAYN	SELEX Yin et al.(2017) ATF3_FL_Methyl-HT-SELEX	0.786	0.391
For this family, TFs with SR scores > 0.782* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Afo_R004508	bZIP	70	133	EEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAELKAQIEELKQERQQLILMLN

Links
Other bZIP family TFs
Other *Aptenodytes forsteri* TFs

206 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
TERB1	Anolis carolinensis	ENSACAG00000002618	N
ENSDNOG00000032686	Dasypus novemcinctus	ENSDNOG00000032686	N
XP_002933719	Xenopus tropicalis	XP_002933719	N

Afo_R004508 (Aptenodytes forsteri) bZIP

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

206 Related TFs

Afo_R004508 **(Aptenodytes forsteri)
bZIP**