CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R000347
(
Geospiza fortis
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Gfo_R000347
T070200_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CG18619
M03649_2.00
Drosophila melanogaster
RTKACGTMAT
ATKACGTMAY
SELEX
Nitta et al.(2015)
CG18619_1
0.869
0.635
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R000347
bZIP
15
79
RKPAKIDLKAKLERSRQSARECRARKKLRYQYLEELVSSRERAICALREELEMYKQWCMAMDQGK
Links
Other
bZIP
family TFs
Other
Geospiza fortis
TFs
140 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh2_pg.C_1860002
Branchiostoma floridae
estExt_fgenesh2_pg.C_1860002
N