Gfo_R010938 (Geospiza fortis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Gfo_R010938 T070219_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Batf3
M08826_2.00 		Mus musculus
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN		 Misc
Kulakovskiy et al.(2013)
BATF3_MOUSE.H11MO.0.A 		0.843 0.828
Batf
M08829_2.00 		Mus musculus
NWSASTCAWHNNDDDANH
DNTHHHNNDWTGASTSWN		 Misc
Kulakovskiy et al.(2013)
BATF_MOUSE.H11MO.0.A 		0.824 0.578
Batf
M09495_2.00 		Mus musculus
VTGASTCABH
DVTGASTCAB		 Misc
Heinz et al.(2010)
Th17-BATF_GSE39756 		0.824 0.578
BATF3
M02833_2.00 		Homo sapiens
YGATGACGTCATCA
TGATGACGTCATCR		 SELEX
Jolma et al.(2013)
BATF3_1 		0.823 0.891
BATF3
M04268_2.00 		Homo sapiens
BRTGACGTCABN
NVTGACGTCAYV		 SELEX
Yin et al.(2017)
BATF3_eDBD_HT-SELEX 		0.823 0.891
BATF3
M04270_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
BATF3_FL_HT-SELEX 		0.823 0.891
BATF3
M04025_2.00 		Homo sapiens
GRTGACGTCAYC
GRTGACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
BATF3.1 		0.823 0.891
BATF3
M04026_2.00 		Homo sapiens
GRTGACGTGGS
SCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
BATF3.2 		0.823 0.891
BATF3
M08794_2.00 		Homo sapiens
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN		 Misc
Kulakovskiy et al.(2013)
BATF3_HUMAN.H11MO.0.B 		0.823 0.891
BATF3
M09962_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF3_02 		0.823 0.891
BATF3
M04269_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
BATF3_eDBD_Methyl-HT-SELEX 		0.823 0.891
BATF3
M04271_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
BATF3_FL_Methyl-HT-SELEX 		0.823 0.891
BATF
M04307_2.00 		Homo sapiens
NVVYGMCACN
NGTGKCRBBN		 SELEX
Yin et al.(2017)
BATF_FL_HT-SELEX 		0.813 0.562
BATF
M07821_2.00 		Homo sapiens
TBASTCAWWNYDRRA
TYYHRNWWTGASTVA		 ChIP-seq
Gerstein et al.(2012)
GM12878_BATF_HudsonAlpha 		0.813 0.562
BATF
M08799_2.00 		Homo sapiens
NWBASTCAWWHHRRRAVH
DBTYYYDDWWTGASTVWN		 Misc
Kulakovskiy et al.(2013)
BATF_HUMAN.H11MO.0.A 		0.813 0.562
BATF
M09971_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_01 		0.813 0.562
BATF
M09972_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_02 		0.813 0.562
BATF
M09973_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_03 		0.813 0.562
BATF
M09974_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_04 		0.813 0.562
BATF
M04308_2.00 		Homo sapiens
NVVYGACACN
NGTGTCRBBN		 SELEX
Yin et al.(2017)
BATF_FL_Methyl-HT-SELEX 		0.813 0.562
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R010938 bZIP 7 70

Links

Other bZIP family TFs
Other Geospiza fortis TFs

120 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000001350 Ailuropoda melanoleuca ENSAMEG00000001350 I 0.834
ENSAMEG00000018338 Ailuropoda melanoleuca ENSAMEG00000018338 I 0.825
Alligator_sinensis_CCG009650.1 Alligator sinensis Alligator_sinensis_CCG009650.1 I 0.830
Alligator_sinensis_CCG009650.2 Alligator sinensis Alligator_sinensis_CCG009650.2 I 0.830
ENSAPLG00000011595 Anas platyrhynchos ENSAPLG00000011595 I 0.825
ENSAPLG00000012252 Anas platyrhynchos ENSAPLG00000012252 I 0.816
ENSACAG00000006345 Anolis carolinensis ENSACAG00000006345 I 0.855
BATF Anolis carolinensis ENSACAG00000016951 I 0.797
Afo_R004510 Aptenodytes forsteri Afo_R004510 I 0.816
Afo_R004730 Aptenodytes forsteri Afo_R004730 I 0.872
ENSAMXG00000010496 Astyanax mexicanus ENSAMXG00000010496 I 0.800
ENSAMXG00000013814 Astyanax mexicanus ENSAMXG00000013814 I 0.823
ENSP00000243440-D1 Bos grunniens ENSP00000243440-D1 I 0.834
ENSP00000286639-D1 Bos grunniens ENSP00000286639-D1 I 0.825
BATF3 Bos taurus ENSBTAG00000011982 I 0.834
BATF Bos taurus ENSBTAG00000025405 I 0.825
Brh_R008527 Buceros rhinoceros Brh_R008527 I 0.816
Brh_R010447 Buceros rhinoceros Brh_R010447 I 0.872
BATF3 Callithrix jacchus ENSCJAG00000015732 I 0.823
BATF Callithrix jacchus ENSCJAG00000020651 I 0.813
Aan_R005676 Calypte anna Aan_R005676 I 0.825
BATF Canis familiaris ENSCAFG00000017044 I 0.825
BATF3 Canis familiaris ENSCAFG00000032161 I 0.834
ENSCPOG00000015436 Cavia porcellus ENSCPOG00000015436 I 0.824
ENSCPOG00000021172 Cavia porcellus ENSCPOG00000021172 I 0.831
Cmyd_10014527 Chelonia mydas Cmyd_10014527 I 0.816
ENSCSAG00000012114 Chlorocebus sabaeus ENSCSAG00000012114 I 0.813
ENSCSAG00000015412 Chlorocebus sabaeus ENSCSAG00000015412 I 0.823
BATF Choloepus hoffmanni ENSCHOG00000005766 I 0.825
batf Danio rerio ENSDARG00000011818 I 0.845
batf3 Danio rerio ENSDARG00000042577 I 0.783
BATF Dasypus novemcinctus ENSDNOG00000047121 I 0.825
ENSDORG00000006028 Dipodomys ordii ENSDORG00000006028 I 0.834
ENSDORG00000012889 Dipodomys ordii ENSDORG00000012889 I 0.825
BATF3 Echinops telfairi ENSETEG00000010953 I 0.828
BATF3 Equus caballus ENSECAG00000011042 I 0.834
BATF Equus caballus ENSECAG00000016422 I 0.825
BATF Felis catus ENSFCAG00000014194 I 0.825
BATF3 Felis catus ENSFCAG00000014614 I 0.831
ENSFALG00000006360 Ficedula albicollis ENSFALG00000006360 I 0.816
ENSFALG00000012404 Ficedula albicollis ENSFALG00000012404 I 0.872
ENSGMOG00000011150 Gadus morhua ENSGMOG00000011150 I 0.803
ENSGALG00000009816 Gallus gallus ENSGALG00000009816 I 0.861
ENSGALG00000010323 Gallus gallus ENSGALG00000010323 I 0.825
batf Gasterosteus aculeatus ENSGACG00000010594 I 0.827
Gfo_R012905 Geospiza fortis Gfo_R012905 I 0.816
BATF Gorilla gorilla ENSGGOG00000002267 I 0.813
BATF3 Gorilla gorilla ENSGGOG00000023446 I 0.823
BATF3 Homo sapiens ENSG00000123685 D 0.823
BATF Homo sapiens ENSG00000156127 D 0.813
ENSSTOG00000007136 Ictidomys tridecemlineatus ENSSTOG00000007136 I 0.838
ENSLACG00000002955 Latimeria chalumnae ENSLACG00000002955 I 0.834
ENSLACG00000017801 Latimeria chalumnae ENSLACG00000017801 I 0.783
ENSLOCG00000000836 Lepisosteus oculatus ENSLOCG00000000836 I 0.828
ENSLOCG00000010533 Lepisosteus oculatus ENSLOCG00000010533 I 0.835
BATF Loxodonta africana ENSLAFG00000011315 I 0.825
BATF3 Loxodonta africana ENSLAFG00000027351 I 0.846
ENSP00000243440 Macaca fascicularis ENSP00000243440 I 0.823
ENSP00000286639 Macaca fascicularis ENSP00000286639 I 0.813
BATF Macaca mulatta ENSMMUG00000003834 I 0.813
BATF3 Macaca mulatta ENSMMUG00000015056 I 0.823
ENSMEUG00000002840 Macropus eugenii ENSMEUG00000002840 I 0.825
BATF Meleagris gallopavo ENSMGAG00000012758 I 0.825
ENSMICG00000014634 Microcebus murinus ENSMICG00000014634 I 0.841
ENSMICG00000016046 Microcebus murinus ENSMICG00000016046 I 0.825
BATF3 Monodelphis domestica ENSMODG00000003055 I 0.846
BATF Monodelphis domestica ENSMODG00000005905 I 0.825
ENSMPUG00000009143 Mustela putorius furo ENSMPUG00000009143 I 0.825
ENSMPUG00000013390 Mustela putorius furo ENSMPUG00000013390 I 0.834
Batf3 Mus musculus ENSMUSG00000026630 D 0.843
Batf Mus musculus ENSMUSG00000034266 D 0.824
Myotis_brandtii_BATF_10012950 Myotis brandtii Myotis_brandtii_BATF_10012950 I 0.825
BATF Myotis lucifugus ENSMLUG00000013360 I 0.825
BATF3 Myotis lucifugus ENSMLUG00000025827 I 0.834
ENSNLEG00000002945 Nomascus leucogenys ENSNLEG00000002945 I 0.823
ENSNLEG00000016492 Nomascus leucogenys ENSNLEG00000016492 I 0.813
BATF Ochotona princeps ENSOPRG00000012041 I 0.825
BATF3 Ochotona princeps ENSOPRG00000013285 I 0.834
Ogr08031 Ophisaurus gracilis Ogr08031 I 0.811
ENSONIG00000015290 Oreochromis niloticus ENSONIG00000015290 I 0.835
BATF3 Ornithorhynchus anatinus ENSOANG00000008505 I 0.869
BATF Oryctolagus cuniculus ENSOCUG00000026625 I 0.825
batf Oryzias latipes ENSORLG00000009061 I 0.835
BATF3 Otolemur garnettii ENSOGAG00000008684 I 0.819
BATF Otolemur garnettii ENSOGAG00000010133 I 0.825
ENSOARG00000001812 Ovis aries ENSOARG00000001812 I 0.825
ENSOARG00000010458 Ovis aries ENSOARG00000010458 I 0.834
BATF3 Pan troglodytes ENSPTRG00000001965 I 0.823
BATF Pan troglodytes ENSPTRG00000006556 I 0.813
ENSPANG00000018466 Papio anubis ENSPANG00000018466 I 0.823
ENSPANG00000021772 Papio anubis ENSPANG00000021772 I 0.813
ENSPSIG00000017659 Pelodiscus sinensis ENSPSIG00000017659 I 0.816
ENSPSIG00000017969 Pelodiscus sinensis ENSPSIG00000017969 I 0.872
ENSPFOG00000007199 Poecilia formosa ENSPFOG00000007199 I 0.835
ENSPFOG00000017107 Poecilia formosa ENSPFOG00000017107 I 0.795
Pvit_01217 Pogona vitticeps Pvit_01217 I 0.829
ENSPPYG00000000234 Pongo abelii ENSPPYG00000000234 I 0.823
ENSPPYG00000006005 Pongo abelii ENSPPYG00000006005 I 0.813
BATF Pteropus vampyrus ENSPVAG00000000674 I 0.825
BATF3 Pteropus vampyrus ENSPVAG00000011828 I 0.834
Batf3 Rattus norvegicus ENSRNOG00000003716 I 0.831
Batf Rattus norvegicus ENSRNOG00000008588 I 0.824
ENSSHAG00000011300 Sarcophilus harrisii ENSSHAG00000011300 I 0.869
ENSSHAG00000017205 Sarcophilus harrisii ENSSHAG00000017205 I 0.825
ENSSSCG00000015594 Sus scrofa ENSSSCG00000015594 I 0.834
BATF3 Sus scrofa ENSSSCG00000026587 I 0.799
BATF Sus scrofa ENSSSCG00000030582 I 0.825
BATF3 Taeniopygia guttata ENSTGUG00000003049 I 0.872
BATF Taeniopygia guttata ENSTGUG00000012220 I 0.825
batf Takifugu rubripes ENSTRUG00000009390 I 0.821
ENSTSYG00000005296 Tarsius syrichta ENSTSYG00000005296 I 0.797
batf Tetraodon nigroviridis ENSTNIG00000016349 I 0.821
BATF3 Tupaia belangeri ENSTBEG00000012725 I 0.831
BATF Tupaia belangeri ENSTBEG00000014581 I 0.825
BATF Tursiops truncatus ENSTTRG00000009370 I 0.824
BATF3 Tursiops truncatus ENSTTRG00000016583 I 0.846
Tal_R011063 Tyto alba Tal_R011063 I 0.872
BATF Vicugna pacos ENSVPAG00000003093 I 0.825
batf Xenopus tropicalis XB-GENE-6258076 I 0.786
ENSXMAG00000003951 Xiphophorus maculatus ENSXMAG00000003951 I 0.835