Cagra.0993s0063 (Capsella grandiflora)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Cagra.0993s0063 T071477_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP16
M06764_2.00 		Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a 		0.893 0.969
BZIP16
M06765_2.00 		Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a 		0.893 0.969
BZIP68
M01770_2.00 		Arabidopsis thaliana
BMCASGBND
HNVCSTGKV		 PBM
Weirauch et al.(2014)
pTH8192 		0.858 0.875
BZIP68
M06752_2.00 		Arabidopsis thaliana
DNWKNHSACGTGGCR
YGCCACGTSDNMWNH		 Dap-seq
OMalley et al.(2016)
bZIP68_col_a 		0.858 0.875
PK23964.1
M01160_2.00 		Cannabis sativa
DNKMCACGTV
BACGTGKMNH		 PBM
Lambert et al.(2019)
pTH10151 		0.857 0.734
GBF1
M01783_2.00 		Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD		 PBM
Weirauch et al.(2014)
pTH7259 		0.849 0.656
GBF1
M09913_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_01 		0.849 0.656
GBF1
M09914_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1F_Q2 		0.849 0.656
GBF1
M09915_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2_01 		0.849 0.656
GBF1
M09916_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2 		0.849 0.656
TAF1_TOBAC
M10079_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAF1_01 		0.808 0.641
TAF1_TOBAC
M10080_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAF1_Q2 		0.808 0.641
EmBP-1
M02659_2.00 		Triticum aestivum
CCACGTSW
WSACGTGG		 SELEX
Mathelier et al.(2014)
MA0128.1 		0.803 0.609
EMBP1_WHEAT
M09921_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EMBP1_02 		0.803 0.609
EMBP1_WHEAT
M09922_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EMBP1_Q2 		0.803 0.609
Q40645_ORYSA
M10050_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$OSBZ8_Q6 		0.801 0.625
Q41109_PHAVU
M10078_2.00 		Phaseolus vulgaris Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ROM_Q2 		0.801 0.609
PK09653.1
M01156_2.00 		Cannabis sativa
NNMCASVNNN
NNNBSTGKNN		 PBM
Lambert et al.(2019)
pTH10114 		0.792 0.641
GBF2
M01781_2.00 		Arabidopsis thaliana
BMCASSNNN
NNNSSTGKV		 PBM
Weirauch et al.(2014)
pTH7258 		0.791 0.516
CPRF3_PETCR
M10071_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF3_01 		0.790 0.594
CPRF3_PETCR
M10072_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF3_Q2 		0.790 0.594
CPRF1_PETCR
M10066_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF1_01 		0.788 0.625
CPRF1_PETCR
M10067_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF1_Q2 		0.788 0.625
CPRF1_PETCR
M10068_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF_Q2 		0.788 0.625
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0993s0063.1.p bZIP 301 370
Cagra.0993s0063.2.p bZIP 301 370

Links

Other bZIP family TFs
Other Capsella grandiflora TFs

306 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_16738 Aegilops tauschii F775_16738 N
F775_17323 Aegilops tauschii F775_17323 N
AMTR_s00152p00031760 Amborella trichopoda AMTR_s00152p00031760 N
Aquca_075_00033 Aquilegia coerulea Aquca_075_00033 N
bZIP23 Arabidopsis lyrata scaffold_303970.1 N
bZIP19 Arabidopsis lyrata scaffold_700623.1 N
BZIP23 Arabidopsis thaliana AT2G16770 N
BZIP19 Arabidopsis thaliana AT4G35040 N
Bostr.18351s0138 Boechera stricta Bostr.18351s0138 N
Bostr.7867s1363 Boechera stricta Bostr.7867s1363 N
BRADI1G30140 Brachypodium distachyon BRADI1G30140 N
BRADI2G21197 Brachypodium distachyon BRADI2G21197 N
BRADI2G52590 Brachypodium distachyon BRADI2G52590 N
Bo1g006780 Brassica oleracea Bo1g006780 N
Bo3g091670 Brassica oleracea Bo3g091670 N
Bo3g167300 Brassica oleracea Bo3g167300 N
Bo9g024230 Brassica oleracea Bo9g024230 N
Bra011580 Brassica rapa Bra011580 N
Bra013048 Brassica rapa Bra013048 N
Bra034668 Brassica rapa Bra034668 N
Cagra.0839s0005 Capsella grandiflora Cagra.0839s0005 N
Cagra.2350s0050 Capsella grandiflora Cagra.2350s0050 N
Carubv10005538m.g Capsella rubella Carubv10005538m.g N
Carubv10014436m.g Capsella rubella Carubv10014436m.g N
evm.TU.supercontig_37.136 Carica papaya evm.TU.supercontig_37.136 N
Cla016078 Citrullus lanatus Cla016078 N
Cla020585 Citrullus lanatus Cla020585 N
Ciclev10028931m.g Citrus clementina Ciclev10028931m.g N
orange1.1g024365m.g Citrus sinensis orange1.1g024365m.g N
Cucsa.234250 Cucumis sativus Cucsa.234250 N
Cucsa.370550 Cucumis sativus Cucsa.370550 N
Eucgr.I01416 Eucalyptus grandis Eucgr.I01416 N
Thhalv10022810m.g Eutrema salsugineum Thhalv10022810m.g N
Thhalv10026007m.g Eutrema salsugineum Thhalv10026007m.g N
gene07554-v1.0-hybrid Fragaria vesca gene07554-v1.0-hybrid N
GLYMA11G11540 Glycine max GLYMA11G11540 N
GLYMA11G16050 Glycine max GLYMA11G16050 N
MLOC_13410 Hordeum vulgare MLOC_13410 N
MLOC_5655 Hordeum vulgare MLOC_5655 N
LPERR01G29490 Leersia perrieri LPERR01G29490 N
LPERR05G17340 Leersia perrieri LPERR05G17340 N
LPERR06G23100 Leersia perrieri LPERR06G23100 N
LPERR11G02130 Leersia perrieri LPERR11G02130 N
LPERR12G02240 Leersia perrieri LPERR12G02240 N
Lus10005073.g Linum usitatissimum Lus10005073.g N
Lus10014121.g Linum usitatissimum Lus10014121.g N
Lus10016368.g Linum usitatissimum Lus10016368.g N
Lus10027847.g Linum usitatissimum Lus10027847.g N
MDP0000190186 Malus domestica MDP0000190186 N
MDP0000893802 Malus domestica MDP0000893802 N
MDP0000898701 Malus domestica MDP0000898701 N
cassava766.valid.m1 Manihot esculenta cassava766.valid.m1 N
cassava767.valid.m1 Manihot esculenta cassava767.valid.m1 N
cassava7721.valid.m1 Manihot esculenta cassava7721.valid.m1 N
mgf003848m Mimulus guttatus mgf003848m N
GSMUA_Achr4G00320_001 Musa acuminata GSMUA_Achr4G00320_001 N
GSMUA_Achr4G10150_001 Musa acuminata GSMUA_Achr4G10150_001 N
GSMUA_Achr7G03840_001 Musa acuminata GSMUA_Achr7G03840_001 N
OBART01G34150 Oryza barthii OBART01G34150 N
OBART11G02390 Oryza barthii OBART11G02390 N
OBART12G02110 Oryza barthii OBART12G02110 N
OB0044G10110 Oryza brachyantha OB0044G10110 N
OB01G42980 Oryza brachyantha OB01G42980 N
OB05G28920 Oryza brachyantha OB05G28920 N
OB12G12480 Oryza brachyantha OB12G12480 N
ORGLA01G0280700 Oryza glaberrima ORGLA01G0280700 N
ORGLA05G0186200 Oryza glaberrima ORGLA05G0186200 N
OGLUM01G38420 Oryza glumaepatula OGLUM01G38420 N
OGLUM05G22660 Oryza glumaepatula OGLUM05G22660 N
OGLUM11G02090 Oryza glumaepatula OGLUM11G02090 N
BGIOSGA004628 Oryza indica BGIOSGA004628 N
BGIOSGA017801 Oryza indica BGIOSGA017801 N
BGIOSGA034759 Oryza indica BGIOSGA034759 N
BGIOSGA036957 Oryza indica BGIOSGA036957 N
OLONG_011776 Oryza longistaminata OLONG_011776 N
OLONG_016758 Oryza longistaminata OLONG_016758 N
OMERI01G30960 Oryza meridionalis OMERI01G30960 N
OMERI12G01070 Oryza meridionalis OMERI12G01070 N
ONIVA01G38950 Oryza nivara ONIVA01G38950 N
ONIVA05G22130 Oryza nivara ONIVA05G22130 N
ONIVA11G02620 Oryza nivara ONIVA11G02620 N
OPUNC01G33180 Oryza punctata OPUNC01G33180 N
OPUNC05G19110 Oryza punctata OPUNC05G19110 N
OPUNC12G02170 Oryza punctata OPUNC12G02170 N
ORUFI01G37470 Oryza rufipogon ORUFI01G37470 N
ORUFI05G22690 Oryza rufipogon ORUFI05G22690 N
ORUFI12G02510 Oryza rufipogon ORUFI12G02510 N
OS01G0801901 Oryza sativa OS01G0801901 N
OS05G0495200 Oryza sativa OS05G0495200 N
OS11G0139500 Oryza sativa OS11G0139500 N
Pavir.Db00007 Panicum virgatum Pavir.Db00007 N
Pavir.Ea03172 Panicum virgatum Pavir.Ea03172 N
Pavir.Eb03174 Panicum virgatum Pavir.Eb03174 N
Pavir.J00911 Panicum virgatum Pavir.J00911 N
Pavir.J05283 Panicum virgatum Pavir.J05283 N
Pavir.J21984 Panicum virgatum Pavir.J21984 N
Pavir.J25286 Panicum virgatum Pavir.J25286 N
PDK_20s1365351g001 Phoenix dactylifera PDK_20s1365351g001 N
PDK_20s1623091g001 Phoenix dactylifera PDK_20s1623091g001 N
gw1.34.187.1 Physcomitrella patens gw1.34.187.1 N
POPTR_0001s05750 Populus trichocarpa POPTR_0001s05750 N
POPTR_0003s20320 Populus trichocarpa POPTR_0003s20320 N
POPTR_0009s13730 Populus trichocarpa POPTR_0009s13730 N
Pm016548 Prunus mume Pm016548 N
Pm020862 Prunus mume Pm020862 N
PRUPE_ppa009913mg Prunus persica PRUPE_ppa009913mg N
PRUPE_ppa019868mg Prunus persica PRUPE_ppa019868mg N
28095.m000094 Ricinus communis 28095.m000094 N
SapurV1A.0009s0600 Salix purpurea SapurV1A.0009s0600 N
SapurV1A.0445s0220 Salix purpurea SapurV1A.0445s0220 N
SapurV1A.0923s0130 Salix purpurea SapurV1A.0923s0130 N
SELMODRAFT_409920 Selaginella moellendorffii SELMODRAFT_409920 N
SELMODRAFT_414462 Selaginella moellendorffii SELMODRAFT_414462 N
Si002893m.g Setaria italica Si002893m.g N
Si007107m.g Setaria italica Si007107m.g N
Si037105m.g Setaria italica Si037105m.g N
Solyc01g111580.2 Solanum lycopersicum Solyc01g111580.2 N
PGSC0003DMG401006188 Solanum tuberosum PGSC0003DMG401006188 N
Sb03g037300 Sorghum bicolor Sb03g037300 N
Sb09g024290 Sorghum bicolor Sb09g024290 N
Sb10g030250 Sorghum bicolor Sb10g030250 N
TCM_042360 Theobroma cacao TCM_042360 N
Traes_1AL_00A8A2030 Triticum aestivum Traes_1AL_00A8A2030 N
TRAES3BF086800020CFD_g Triticum aestivum TRAES3BF086800020CFD_g N
Traes_5BS_FC54F9BEA Triticum aestivum Traes_5BS_FC54F9BEA N
Traes_7AL_C7CF7087B Triticum aestivum Traes_7AL_C7CF7087B N
Traes_7DL_7DDA16622 Triticum aestivum Traes_7DL_7DDA16622 N
TRIUR3_01653 Triticum urartu TRIUR3_01653 N
TRIUR3_18393 Triticum urartu TRIUR3_18393 N
TRIUR3_21208 Triticum urartu TRIUR3_21208 N
TRIUR3_23486 Triticum urartu TRIUR3_23486 N
VIT_03s0038g02420 Vitis vinifera VIT_03s0038g02420 N
ATBZIP24 Vitis vinifera VIT_13s0158g00380 N
GRMZM2G000171 Zea mays GRMZM2G000171 N
GRMZM2G033230 Zea mays GRMZM2G033230 N
GRMZM2G175870 Zea mays GRMZM2G175870 N