CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.4290s0007
(
Capsella grandiflora
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Cagra.4290s0007
T071521_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.4290s0007.1.p
bZIP
128
190
TDERKRKRMESNRESAKRSRMRKQSHIDNLRNQVNRLDLENRELGNRLRLVLHQLQRVNTDNN
Links
Other
bZIP
family TFs
Other
Capsella grandiflora
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AtbZIP7
Arabidopsis lyrata
Al_scaffold_0007_270
N
0.903
AtbZIP6
Arabidopsis lyrata
scaffold_400242.1
N
0.788
AtbZIP6
Arabidopsis thaliana
AT2G22850
N
0.788
AtbZIP7
Arabidopsis thaliana
AT4G37730
N
0.908
Bostr.7867s1634
Boechera stricta
Bostr.7867s1634
N
0.881
Bo1g003470
Brassica oleracea
Bo1g003470
N
0.868
Bo7g118720
Brassica oleracea
Bo7g118720
N
0.884
Bra011780
Brassica rapa
Bra011780
N
0.868
Bra017850
Brassica rapa
Bra017850
N
0.884
Cagra.9757s0009
Capsella grandiflora
Cagra.9757s0009
N
0.786
Carubv10007844m.g
Capsella rubella
Carubv10007844m.g
N
0.908
Cla014262
Citrullus lanatus
Cla014262
N
0.815
Cucsa.103380
Cucumis sativus
Cucsa.103380
N
0.815
Eucgr.F01867
Eucalyptus grandis
Eucgr.F01867
N
0.787
Thhalv10000309m.g
Eutrema salsugineum
Thhalv10000309m.g
N
0.788
Thhalv10027117m.g
Eutrema salsugineum
Thhalv10027117m.g
N
0.905