MDP0000545420 (Malus domestica)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 MDP0000545420 T072218_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK09653.1
M01156_2.00 		Cannabis sativa
NNMCASVNNN
NNNBSTGKNN		 PBM
Lambert et al.(2019)
pTH10114 		0.858 0.781
Q40645_ORYSA
M10050_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$OSBZ8_Q6 		0.844 0.734
Q41109_PHAVU
M10078_2.00 		Phaseolus vulgaris Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ROM_Q2 		0.844 0.734
GBF1
M01783_2.00 		Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD		 PBM
Weirauch et al.(2014)
pTH7259 		0.843 0.609
GBF1
M09913_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_01 		0.843 0.609
GBF1
M09914_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1F_Q2 		0.843 0.609
GBF1
M09915_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2_01 		0.843 0.609
GBF1
M09916_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2 		0.843 0.609
GBF3
M01779_2.00 		Arabidopsis thaliana
NBMCASSTVD
HBASSTGKVN		 PBM
Weirauch et al.(2014)
pTH7328 		0.840 0.703
GBF3
M06770_2.00 		Arabidopsis thaliana
DNHDNHSACGTGKMD
HKMCACGTSDNHDNH		 Dap-seq
OMalley et al.(2016)
GBF3_colamp 		0.840 0.703
GBF3
M06771_2.00 		Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH		 Dap-seq
OMalley et al.(2016)
GBF3_col 		0.840 0.703
TAF1_TOBAC
M10079_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAF1_01 		0.839 0.750
TAF1_TOBAC
M10080_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAF1_Q2 		0.839 0.750
GBF2
M01781_2.00 		Arabidopsis thaliana
BMCASSNNN
NNNSSTGKV		 PBM
Weirauch et al.(2014)
pTH7258 		0.831 0.625
CPRF3_PETCR
M10071_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF3_01 		0.807 0.562
CPRF3_PETCR
M10072_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF3_Q2 		0.807 0.562
CPRF1_PETCR
M10066_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF1_01 		0.805 0.719
CPRF1_PETCR
M10067_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF1_Q2 		0.805 0.719
CPRF1_PETCR
M10068_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF_Q2 		0.805 0.719
BZIP68
M01770_2.00 		Arabidopsis thaliana
BMCASGBND
HNVCSTGKV		 PBM
Weirauch et al.(2014)
pTH8192 		0.802 0.625
BZIP68
M06752_2.00 		Arabidopsis thaliana
DNWKNHSACGTGGCR
YGCCACGTSDNMWNH		 Dap-seq
OMalley et al.(2016)
bZIP68_col_a 		0.802 0.625
BZIP16
M06764_2.00 		Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a 		0.795 0.656
BZIP16
M06765_2.00 		Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a 		0.795 0.656
PK23964.1
M01160_2.00 		Cannabis sativa
DNKMCACGTV
BACGTGKMNH		 PBM
Lambert et al.(2019)
pTH10151 		0.787 0.625
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000545420 bZIP 134 197

Links

Other bZIP family TFs
Other Malus domestica TFs

275 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00040p00057740 Amborella trichopoda AMTR_s00040p00057740 I
fgenesh2_kg.8__404__AT5G44080.1 Arabidopsis lyrata fgenesh2_kg.8__404__AT5G44080.1 N
scaffold_105455.1 Arabidopsis lyrata scaffold_105455.1 N
fgenesh2_kg.1__328__AT1G03970.1 Arabidopsis lyrata fgenesh2_kg.1__328__AT1G03970.1 N
Al_scaffold_0007_1421 Arabidopsis lyrata Al_scaffold_0007_1421 N
AT5G44080 Arabidopsis thaliana AT5G44080 N
GBF4 Arabidopsis thaliana AT1G03970 N
Bostr.26675s0358 Boechera stricta Bostr.26675s0358 N
Bostr.3148s0051 Boechera stricta Bostr.3148s0051 N
Bo5g004230 Brassica oleracea Bo5g004230 N
Bo7g067030 Brassica oleracea Bo7g067030 N
Bra015281 Brassica rapa Bra015281 N
PK16522.1 Cannabis sativa PK16522.1 N
Cagra.12696s0002 Capsella grandiflora Cagra.12696s0002 N
Cagra.1671s0014 Capsella grandiflora Cagra.1671s0014 N
Carubv10011573m.g Capsella rubella Carubv10011573m.g N
Carubv10027647m.g Capsella rubella Carubv10027647m.g N
evm.TU.supercontig_21.207 Carica papaya evm.TU.supercontig_21.207 N
Ca_04375 Cicer arietinum Ca_04375 N
Cla014026 Citrullus lanatus Cla014026 N
Ciclev10002059m.g Citrus clementina Ciclev10002059m.g I
orange1.1g025985m.g Citrus sinensis orange1.1g025985m.g I
Cucsa.363740 Cucumis sativus Cucsa.363740 I
Thhalv10003246m.g Eutrema salsugineum Thhalv10003246m.g N
Thhalv10009710m.g Eutrema salsugineum Thhalv10009710m.g N
gene08154-v1.0-hybrid Fragaria vesca gene08154-v1.0-hybrid N
GLYMA10G36820 Glycine max GLYMA10G36820 N
Gorai.005G078500 Gossypium raimondii Gorai.005G078500 N
LPERR05G14180 Leersia perrieri LPERR05G14180 I
Lus10028575.g Linum usitatissimum Lus10028575.g N
chr5.CM0052.120.nc Lotus japonicus chr5.CM0052.120.nc N
MDP0000208334 Malus domestica MDP0000208334 N
cassava12750.valid.m1 Manihot esculenta cassava12750.valid.m1 I
MTR_1g098590 Medicago truncatula MTR_1g098590 N
MTR_4g094390 Medicago truncatula MTR_4g094390 I
mgf008848m Mimulus guttatus mgf008848m N
GSMUA_Achr3G22470_001 Musa acuminata GSMUA_Achr3G22470_001 I
OBART05G17920 Oryza barthii OBART05G17920 I
OB05G25740 Oryza brachyantha OB05G25740 I
ORGLA05G0154900 Oryza glaberrima ORGLA05G0154900 I
OGLUM05G18920 Oryza glumaepatula OGLUM05G18920 I
BGIOSGA019930 Oryza indica BGIOSGA019930 I
OMERI05G15500 Oryza meridionalis OMERI05G15500 I
ONIVA05G18780 Oryza nivara ONIVA05G18780 I
OPUNC05G15820 Oryza punctata OPUNC05G15820 I
ORUFI05G19090 Oryza rufipogon ORUFI05G19090 I
OS05G0437700 Oryza sativa OS05G0437700 I
LOC_Os05g36160 Oryza sativa LOC_Os05g36160 D
POPTR_0002s06800 Populus trichocarpa POPTR_0002s06800 I
POPTR_0005s21500 Populus trichocarpa POPTR_0005s21500 I
Pm022545 Prunus mume Pm022545 I
29863.m001047 Ricinus communis 29863.m001047 N
SapurV1A.0134s0060 Salix purpurea SapurV1A.0134s0060 I
SapurV1A.0625s0150 Salix purpurea SapurV1A.0625s0150 I
SapurV1A.5129s0010 Salix purpurea SapurV1A.5129s0010 I
Solyc04g071510.2 Solanum lycopersicum Solyc04g071510.2 I
TCM_035623 Theobroma cacao TCM_035623 N
VIT_18s0072g00470 Vitis vinifera VIT_18s0072g00470 N