Pavir.Ba00224 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.Ba00224 T072316_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP18
M01777_2.00 		Arabidopsis thaliana
NDMCARNHNN
NNDNYTGKHN		 PBM
Weirauch et al.(2014)
pTH7316 		0.787 0.964
BZIP18
M06768_2.00 		Arabidopsis thaliana
DTGMCAGCTDD
HHAGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP18_colamp_a 		0.787 0.964
BZIP18
M06769_2.00 		Arabidopsis thaliana
TGMCAGCTKKN
NMMAGCTGKCA		 Dap-seq
OMalley et al.(2016)
bZIP18_col_v31 		0.787 0.964
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba00224.1.p bZIP 166 220

Links

Other bZIP family TFs
Other Panicum virgatum TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aqu1.214576 Amphimedon queenslandica Aqu1.214576 N 0.000
GB55193 Apis mellifera GB55193 N 0.000
ACEP15271 Atta cephalotes ACEP15271 N 0.000
Cflo_03461--XP_391891.1_APIME Camponotus floridanus Cflo_03461--XP_391891.1_APIME N 0.000
CLEC008069 Cimex lectularius CLEC008069 N 0.000
CGI_10005894 Crassostrea gigas CGI_10005894 N 0.000
DAPPUDRAFT_303802 Daphnia pulex DAPPUDRAFT_303802 N 0.000
GH13580 Drosophila grimshawi FBgn0121056 N 0.000
GI24194 Drosophila mojavensis FBgn0146917 N 0.000
GJ21463 Drosophila virilis FBgn0208589 N 0.000
GK18102 Drosophila willistoni FBgn0220101 N 0.000
ENSGMOG00000003250 Gadus morhua ENSGMOG00000003250 I 0.000
Hsal_01990--XP_391891.1_APIME Harpegnathos saltator Hsal_01990--XP_391891.1_APIME N 0.000
MDOA000183 Musca domestica MDOA000183 N 0.000
NV13275 Nasonia vitripennis NV13275 N 0.000
Ocbimv22013214m.g Octopus bimaculoides Ocbimv22013214m.g I 0.000
ENSPMAG00000000497 Petromyzon marinus ENSPMAG00000000497 I 0.000
Sakowv30043886m.g Saccoglossus kowalevskii Sakowv30043886m.g I 0.000
L798_06852 Zootermopsis nevadensis L798_06852 N 0.000