Pavir.Cb00560 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.Cb00560 T072351_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRMZM2G479885
M10040_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$OCSBF1_01 		0.883 0.953
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Cb00560.1.p bZIP 21 84

Links

Other bZIP family TFs
Other Panicum virgatum TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000008017 Ailuropoda melanoleuca ENSAMEG00000008017 I 0.000
ENSAMEG00000015664 Ailuropoda melanoleuca ENSAMEG00000015664 I 0.000
Alligator_sinensis_CCG000418.1 Alligator sinensis Alligator_sinensis_CCG000418.1 I 0.000
Alligator_sinensis_CCG007724.1 Alligator sinensis Alligator_sinensis_CCG007724.1 I 0.000
ENSAPLG00000005866 Anas platyrhynchos ENSAPLG00000005866 I 0.000
ENSAPLG00000007187 Anas platyrhynchos ENSAPLG00000007187 I 0.000
ENSAPLG00000011493 Anas platyrhynchos ENSAPLG00000011493 I 0.000
Afo_R002975 Aptenodytes forsteri Afo_R002975 I 0.000
Afo_R006180 Aptenodytes forsteri Afo_R006180 I 0.000
Afo_R010049 Aptenodytes forsteri Afo_R010049 I 0.000
ENSAMXG00000000403 Astyanax mexicanus ENSAMXG00000000403 I 0.000
ENSAMXG00000009363 Astyanax mexicanus ENSAMXG00000009363 I 0.000
ENSAMXG00000014990 Astyanax mexicanus ENSAMXG00000014990 I 0.000
ENSAMXG00000018669 Astyanax mexicanus ENSAMXG00000018669 I 0.000
ENSBTAP00000021144-D1 Bos grunniens ENSBTAP00000021144-D1 I 0.000
ENSBTAP00000028921-D1 Bos grunniens ENSBTAP00000028921-D1 I 0.000
ENSP00000376461-D1 Bos grunniens ENSP00000376461-D1 I 0.000
RORA Bos taurus ENSBTAG00000015904 I 0.000
RORC Bos taurus ENSBTAG00000017405 I 0.000
RORB Bos taurus ENSBTAG00000021699 I 0.000
gw.311.78.1 Branchiostoma floridae gw.311.78.1 I 0.000
Brh_R003242 Buceros rhinoceros Brh_R003242 I 0.000
Brh_R004006 Buceros rhinoceros Brh_R004006 I 0.000
RORB Callithrix jacchus ENSCJAG00000001216 I 0.000
RORA Callithrix jacchus ENSCJAG00000003989 I 0.000
RORC Callithrix jacchus ENSCJAG00000008023 I 0.000
Aan_R009242 Calypte anna Aan_R009242 I 0.000
Aan_R011707 Calypte anna Aan_R011707 I 0.000
Aan_R015083 Calypte anna Aan_R015083 I 0.000
RORB Canis familiaris ENSCAFG00000001769 I 0.000
RORA Canis familiaris ENSCAFG00000016700 I 0.000
RORA Cavia porcellus ENSCPOG00000008494 I 0.000
RORB Cavia porcellus ENSCPOG00000010612 I 0.000
Cmyd_10000975 Chelonia mydas Cmyd_10000975 I 0.000
Cmyd_10006717 Chelonia mydas Cmyd_10006717 I 0.000
ENSCSAG00000001825 Chlorocebus sabaeus ENSCSAG00000001825 I 0.000
ENSCSAG00000008161 Chlorocebus sabaeus ENSCSAG00000008161 I 0.000
ENSCSAG00000012081 Chlorocebus sabaeus ENSCSAG00000012081 I 0.000
RORB Choloepus hoffmanni ENSCHOG00000009723 I 0.000
RORA Choloepus hoffmanni ENSCHOG00000011593 I 0.000
ENSCING00000002152 Ciona intestinalis ENSCING00000002152 I 0.000
ENSCSAVG00000009992 Ciona savignyi ENSCSAVG00000009992 I 0.000
rorab Danio rerio ENSDARG00000001910 I 0.000
rorcb Danio rerio ENSDARG00000017780 I 0.000
roraa Danio rerio ENSDARG00000031768 I 0.000
rorb Danio rerio ENSDARG00000033498 I 0.000
rorca Danio rerio ENSDARG00000057231 I 0.000
RORC Dasypus novemcinctus ENSDNOG00000033488 I 0.000
RORA Dasypus novemcinctus ENSDNOG00000043276 I 0.000
DILT_0001314401 Diphyllobothrium latum DILT_0001314401 I 0.000
Rora Dipodomys ordii ENSDORG00000001826 I 0.000
Rorc Dipodomys ordii ENSDORG00000015326 I 0.000
RORA Echinops telfairi ENSETEG00000001493 I 0.000
RORB Echinops telfairi ENSETEG00000017457 I 0.000
RORC Equus caballus ENSECAG00000000918 I 0.000
RORA Equus caballus ENSECAG00000016384 I 0.000
RORB Equus caballus ENSECAG00000024312 I 0.000
RORB Erinaceus europaeus ENSEEUG00000014274 I 0.000
RORA Erinaceus europaeus ENSEEUG00000015809 I 0.000
RORB Felis catus ENSFCAG00000011421 I 0.000
RORA Felis catus ENSFCAG00000013642 I 0.000
ENSFALG00000012589 Ficedula albicollis ENSFALG00000012589 I 0.000
ENSFALG00000012763 Ficedula albicollis ENSFALG00000012763 I 0.000
ENSGMOG00000006930 Gadus morhua ENSGMOG00000006930 I 0.000
ENSGMOG00000012277 Gadus morhua ENSGMOG00000012277 I 0.000
ENSGALG00000001035 Gallus gallus ENSGALG00000001035 I 0.000
RORA Gallus gallus ENSGALG00000003759 I 0.000
RORB Gallus gallus ENSGALG00000015150 I 0.000
roraa Gasterosteus aculeatus ENSGACG00000010672 I 0.000
rorb Gasterosteus aculeatus ENSGACG00000011556 I 0.000
rorca Gasterosteus aculeatus ENSGACG00000012280 I 0.000
rorcb Gasterosteus aculeatus ENSGACG00000015341 I 0.000
Gfo_R007588 Geospiza fortis Gfo_R007588 I 0.000
Gfo_R008263 Geospiza fortis Gfo_R008263 I 0.000
Gfo_R008829 Geospiza fortis Gfo_R008829 I 0.000
RORA Gorilla gorilla ENSGGOG00000000541 I 0.000
RORC Gorilla gorilla ENSGGOG00000002223 I 0.000
RORB Gorilla gorilla ENSGGOG00000011970 I 0.000
RORA Homo sapiens ENSG00000069667 D 0.000
RORC Homo sapiens ENSG00000143365 D 0.000
RORB Homo sapiens ENSG00000198963 D 0.000
ENSSTOG00000012400 Ictidomys tridecemlineatus ENSSTOG00000012400 I 0.000
ENSSTOG00000013264 Ictidomys tridecemlineatus ENSSTOG00000013264 I 0.000
ENSSTOG00000019386 Ictidomys tridecemlineatus ENSSTOG00000019386 I 0.000
ENSLACG00000006103 Latimeria chalumnae ENSLACG00000006103 I 0.000
ENSLACG00000017448 Latimeria chalumnae ENSLACG00000017448 I 0.000
ENSLOCG00000006502 Lepisosteus oculatus ENSLOCG00000006502 I 0.000
ENSLOCG00000009712 Lepisosteus oculatus ENSLOCG00000009712 I 0.000
ENSLOCG00000014779 Lepisosteus oculatus ENSLOCG00000014779 I 0.000
RORA Loxodonta africana ENSLAFG00000000577 I 0.000
RORB Loxodonta africana ENSLAFG00000012757 I 0.000
RORC Loxodonta africana ENSLAFG00000020960 I 0.000
ENSP00000261523 Macaca fascicularis ENSP00000261523 I 0.000
ENSP00000376461 Macaca fascicularis ENSP00000376461 I 0.000
ENSP00000379507 Macaca fascicularis ENSP00000379507 I 0.000
RORC Macaca mulatta ENSMMUG00000012138 I 0.000
RORB Macaca mulatta ENSMMUG00000012571 I 0.000
RORA Macaca mulatta ENSMMUG00000018192 I 0.000
ENSMEUG00000008146 Macropus eugenii ENSMEUG00000008146 I 0.000
ENSMGAG00000002222 Meleagris gallopavo ENSMGAG00000002222 I 0.000
RORA Meleagris gallopavo ENSMGAG00000004471 I 0.000
RORB Microcebus murinus ENSMICG00000007512 I 0.000
RORA Microcebus murinus ENSMICG00000010861 I 0.000
RORB Monodelphis domestica ENSMODG00000002046 I 0.000
ENSMODG00000004462 Monodelphis domestica ENSMODG00000004462 I 0.000
RORA Monodelphis domestica ENSMODG00000011532 I 0.000
RORC Monodelphis domestica ENSMODG00000018911 I 0.000
ENSMPUG00000008883 Mustela putorius furo ENSMPUG00000008883 I 0.000
Rorc Mus musculus ENSMUSG00000028150 D 0.000
Rora Mus musculus ENSMUSG00000032238 D 0.000
Rorb Mus musculus ENSMUSG00000036192 D 0.000
Myotis_brandtii_RORA_10029423 Myotis brandtii Myotis_brandtii_RORA_10029423 I 0.000
Myotis_brandtii_RORB_10034418 Myotis brandtii Myotis_brandtii_RORB_10034418 I 0.000
Myotis_brandtii_RORC_10008053 Myotis brandtii Myotis_brandtii_RORC_10008053 I 0.000
RORA Myotis lucifugus ENSMLUG00000002493 I 0.000
RORB Myotis lucifugus ENSMLUG00000006436 I 0.000
RORC Myotis lucifugus ENSMLUG00000029229 I 0.000
ENSNLEG00000001398 Nomascus leucogenys ENSNLEG00000001398 I 0.000
ENSNLEG00000010305 Nomascus leucogenys ENSNLEG00000010305 I 0.000
ENSNLEG00000011865 Nomascus leucogenys ENSNLEG00000011865 I 0.000
RORA Ochotona princeps ENSOPRG00000012364 I 0.000
RORB Ochotona princeps ENSOPRG00000016130 I 0.000
RORC Ochotona princeps ENSOPRG00000018310 I 0.000
Ogr03392 Ophisaurus gracilis Ogr03392 I 0.000
ENSONIG00000004686 Oreochromis niloticus ENSONIG00000004686 I 0.000
ENSONIG00000010247 Oreochromis niloticus ENSONIG00000010247 I 0.000
ENSONIG00000010762 Oreochromis niloticus ENSONIG00000010762 I 0.000
ENSONIG00000015289 Oreochromis niloticus ENSONIG00000015289 I 0.000
ENSONIG00000015603 Oreochromis niloticus ENSONIG00000015603 I 0.000
RORB Ornithorhynchus anatinus ENSOANG00000011655 I 0.000
RORA Ornithorhynchus anatinus ENSOANG00000012345 I 0.000
RORB Oryctolagus cuniculus ENSOCUG00000003732 I 0.000
RORA Oryctolagus cuniculus ENSOCUG00000012900 I 0.000
RORC Oryctolagus cuniculus ENSOCUG00000022907 I 0.000
rorca Oryzias latipes ENSORLG00000003765 I 0.000
roraa Oryzias latipes ENSORLG00000007645 I 0.000
rorb Oryzias latipes ENSORLG00000012441 I 0.000
RORB Otolemur garnettii ENSOGAG00000001523 I 0.000
RORA Otolemur garnettii ENSOGAG00000007357 I 0.000
RORC Otolemur garnettii ENSOGAG00000024385 I 0.000
ENSOARG00000012659 Ovis aries ENSOARG00000012659 I 0.000
ENSOARG00000020816 Ovis aries ENSOARG00000020816 I 0.000
ENSOARG00000021060 Ovis aries ENSOARG00000021060 I 0.000
RORA Pan troglodytes ENSPTRG00000007134 I 0.000
RORB Pan troglodytes ENSPTRG00000021025 I 0.000
RORC Pan troglodytes ENSPTRG00000032436 I 0.000
ENSPANG00000017172 Papio anubis ENSPANG00000017172 I 0.000
ENSPANG00000020758 Papio anubis ENSPANG00000020758 I 0.000
ENSPANG00000024927 Papio anubis ENSPANG00000024927 I 0.000
ENSPSIG00000005579 Pelodiscus sinensis ENSPSIG00000005579 I 0.000
ENSPSIG00000011314 Pelodiscus sinensis ENSPSIG00000011314 I 0.000
ENSPSIG00000016262 Pelodiscus sinensis ENSPSIG00000016262 I 0.000
ENSPMAG00000009286 Petromyzon marinus ENSPMAG00000009286 I 0.000
ENSPFOG00000000838 Poecilia formosa ENSPFOG00000000838 I 0.000
ENSPFOG00000003699 Poecilia formosa ENSPFOG00000003699 I 0.000
ENSPFOG00000012359 Poecilia formosa ENSPFOG00000012359 I 0.000
ENSPFOG00000015704 Poecilia formosa ENSPFOG00000015704 I 0.000
ENSPFOG00000017745 Poecilia formosa ENSPFOG00000017745 I 0.000
Pvit_09819 Pogona vitticeps Pvit_09819 I 0.000
Pvit_12494 Pogona vitticeps Pvit_12494 I 0.000
Pvit_17369 Pogona vitticeps Pvit_17369 I 0.000
Pvit_17370 Pogona vitticeps Pvit_17370 I 0.000
ENSPPYG00000000853 Pongo abelii ENSPPYG00000000853 I 0.000
ENSPPYG00000006528 Pongo abelii ENSPPYG00000006528 I 0.000
ENSPPYG00000019294 Pongo abelii ENSPPYG00000019294 I 0.000
RORC Procavia capensis ENSPCAG00000005628 I 0.000
RORA Procavia capensis ENSPCAG00000006566 I 0.000
RORB Procavia capensis ENSPCAG00000012274 I 0.000
RORB Pteropus vampyrus ENSPVAG00000007216 I 0.000
RORC Pteropus vampyrus ENSPVAG00000008917 I 0.000
RORA Pteropus vampyrus ENSPVAG00000011408 I 0.000
Rorb Rattus norvegicus ENSRNOG00000013413 I 0.000
Rorc Rattus norvegicus ENSRNOG00000020836 I 0.000
Rora Rattus norvegicus ENSRNOG00000027145 I 0.000
ENSSHAG00000002191 Sarcophilus harrisii ENSSHAG00000002191 I 0.000
ENSSHAG00000015734 Sarcophilus harrisii ENSSHAG00000015734 I 0.000
ENSSHAG00000015984 Sarcophilus harrisii ENSSHAG00000015984 I 0.000
ENSSHAG00000018693 Sarcophilus harrisii ENSSHAG00000018693 I 0.000
SSLN_0000693201 Schistocephalus solidus SSLN_0000693201 I 0.000
SPER_0002219401 Spirometra erinaceieuropaei SPER_0002219401 I 0.000
RORA Sus scrofa ENSSSCG00000004576 I 0.000
RORB Sus scrofa ENSSSCG00000005268 I 0.000
RORC Sus scrofa ENSSSCG00000026427 I 0.000
ENSTGUG00000000264 Taeniopygia guttata ENSTGUG00000000264 I 0.000
RORB Taeniopygia guttata ENSTGUG00000000785 I 0.000
RORA Taeniopygia guttata ENSTGUG00000005333 I 0.000
ENSTRUG00000002901 Takifugu rubripes ENSTRUG00000002901 I 0.000
rorca Takifugu rubripes ENSTRUG00000003189 I 0.000
rorcb Takifugu rubripes ENSTRUG00000005569 I 0.000
roraa Takifugu rubripes ENSTRUG00000010553 I 0.000
ENSTSYG00000001170 Tarsius syrichta ENSTSYG00000001170 I 0.000
ENSTSYG00000007907 Tarsius syrichta ENSTSYG00000007907 I 0.000
ENSTSYG00000010455 Tarsius syrichta ENSTSYG00000010455 I 0.000
roraa Tetraodon nigroviridis ENSTNIG00000008390 I 0.000
rorb Tetraodon nigroviridis ENSTNIG00000014682 D 0.000
rorcb Tetraodon nigroviridis ENSTNIG00000015337 I 0.000
RORA Tupaia belangeri ENSTBEG00000003065 I 0.000
RORB Tupaia belangeri ENSTBEG00000010761 I 0.000
RORC Tursiops truncatus ENSTTRG00000003151 I 0.000
RORA Tursiops truncatus ENSTTRG00000007718 I 0.000
Tal_R010110 Tyto alba Tal_R010110 I 0.000
RORB Vicugna pacos ENSVPAG00000003390 I 0.000
RORA Vicugna pacos ENSVPAG00000007893 I 0.000
rora Xenopus tropicalis XB-GENE-478535 I 0.000
rorb Xenopus tropicalis XB-GENE-484846 I 0.000
XP_002937524 Xenopus tropicalis XP_002937524 I 0.000
ENSXMAG00000003228 Xiphophorus maculatus ENSXMAG00000003228 I 0.000
ENSXMAG00000015567 Xiphophorus maculatus ENSXMAG00000015567 I 0.000
ENSXMAG00000018442 Xiphophorus maculatus ENSXMAG00000018442 I 0.000
ENSXMAG00000019296 Xiphophorus maculatus ENSXMAG00000019296 I 0.000