CpipJ_CPIJ010652 (Culex pipiens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 CpipJ_CPIJ010652 T077684_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bowl
M03676_2.00 		Drosophila melanogaster
GCGTAABACNRGKAGYN
NRCTMCYNGTVTTACGC		 SELEX
Nitta et al.(2015)
bowl_1 		0.809 0.939
bowl
M03677_2.00 		Drosophila melanogaster
NGCTACYGTRTTACGCN
NGCGTAAYACRGTAGCN		 SELEX
Nitta et al.(2015)
bowl_2 		0.809 0.939
sob
M03674_2.00 		Drosophila melanogaster
RCTACYGNRTTACGCV
BGCGTAAYNCRGTAGY		 SELEX
Nitta et al.(2015)
sob_1 		0.809 0.939
sob
M03675_2.00 		Drosophila melanogaster
NGCGTAABNSNRGTAGY
RCTACYNSNVTTACGCN		 SELEX
Nitta et al.(2015)
sob_2 		0.809 0.939
bowl
M06090_2.00 		Drosophila melanogaster
RCTWCYGK
MCRGWAGY		 B1H
Zhu et al.(2011)
bowl_SANGER_5_FBgn0004893 		0.809 0.939
sob
M06088_2.00 		Drosophila melanogaster
GCTWCTGBDNBDV
BHVNHVCAGWAGC		 B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892 		0.809 0.939
sob
M06089_2.00 		Drosophila melanogaster
BDGCTACYGKDBNN
NNVHMCRGTAGCHV		 B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892 		0.809 0.939
OSR2
M04521_2.00 		Homo sapiens
NGCTACYGBD
HVCRGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX 		0.793 0.887
OSR2
M08324_2.00 		Homo sapiens
NBDGCTNCTGN
NCAGNAGCHVN		 ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME 		0.793 0.887
OSR2
M08908_2.00 		Homo sapiens
NBHNYWGCTNCTSHDB
VHDSAGNAGCWRNDVN		 Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C 		0.793 0.887
OSR2
M04522_2.00 		Homo sapiens
NGCTACTGND
HNCAGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX 		0.793 0.887
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ010652-RA C2H2 ZF 240 262
CpipJ_CPIJ010652-RA C2H2 ZF 268 290
CpipJ_CPIJ010652-RA C2H2 ZF 296 318
CpipJ_CPIJ010652-RA C2H2 ZF 324 346
CpipJ_CPIJ010652-RA C2H2 ZF 352 374

Links

Other C2H2 ZF family TFs
Other Culex pipiens TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGOS_ADL067C Ashbya gossypii AGOS_ADL067C I 0.000
CAGL0J03014g Candida glabrata CAGL0J03014g I 0.000
Ecym_4329 Eremothecium cymbalariae Ecym_4329 I 0.000
KAFR_0I01770 Kazachstania africana KAFR_0I01770 I 0.000
KAFR_0L00930 Kazachstania africana KAFR_0L00930 I 0.000
KNAG_0D01580 Kazachstania naganishii KNAG_0D01580 I 0.000
KNAG_0L01530 Kazachstania naganishii KNAG_0L01530 I 0.000
KLLA0_C08151g Kluyveromyces lactis KLLA0_C08151g I 0.000
KLTH0A04444g Kluyveromyces thermotolerans KLTH0A04444g I 0.000
Kwal_5842 Kluyveromyces waltii Kwal_5842 I 0.000
SAKL0F08734g Lachancea kluyveri SAKL0F08734g I 0.000
LALA0_S01e02388g Lachancea lanzarotensis LALA0_S01e02388g I 0.000
KLTH0A04444g Lachancea thermotolerans KLTH0A04444g I 0.000
NCAS_0A13540 Naumovozyma castellii NCAS_0A13540 I 0.000
NCAS_0E03320 Naumovozyma castellii NCAS_0E03320 I 0.000
NDAI_0A02490 Naumovozyma dairenensis NDAI_0A02490 I 0.000
NDAI_0E04810 Naumovozyma dairenensis NDAI_0E04810 I 0.000
SU7_1620 Saccharomyces arboricola SU7_1620 I 0.000
7027_YER064C Saccharomyces bayanus 7027_YER064C I 0.000
11559_YIL056W Saccharomyces bayanus 11559_YIL056W I 0.000
Scas_Contig701.7 Saccharomyces castellii Scas_Contig701.7 I 0.000
Scas_Contig704.29 Saccharomyces castellii Scas_Contig704.29 I 0.000
VHR2 Saccharomyces cerevisiae YER064C D 0.000
SKUD_176205 Saccharomyces kudriavzevii SKUD_176205 I 0.000
6651_YER064C Saccharomyces mikatae 6651_YER064C I 0.000
10921_YIL056W Saccharomyces mikatae 10921_YIL056W I 0.000
6292_YER064C Saccharomyces paradoxus 6292_YER064C I 0.000
11035_YIL056W Saccharomyces paradoxus 11035_YIL056W I 0.000
AACERI_AaceriADL067C Saccharomycetaceae sp ashbya aceri AACERI_AaceriADL067C I 0.000
TBLA_0C04650 Tetrapisispora blattae TBLA_0C04650 I 0.000
TPHA_0J00900 Tetrapisispora phaffii TPHA_0J00900 I 0.000
TDEL_0H01980 Torulaspora delbrueckii TDEL_0H01980 I 0.000
Kpol_1066p52 Vanderwaltozyma polyspora Kpol_1066p52 I 0.000
ZBAI_05302 Zygosaccharomyces bailii ZBAI_05302 I 0.000
ZBAI_00133 Zygosaccharomyces bailii ZBAI_00133 I 0.000
ZYRO0C08250g Zygosaccharomyces rouxii ZYRO0C08250g I 0.000