RO3G_06969 (Rhizopus oryzae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 RO3G_06969 T078185_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RO3G_06969
M01435_2.00		 Rhizopus oryzae
HCCCCRCA
TGYGGGGD		 PBM
Najafabadi et al.(2015a)
pTH10223		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01435_2.00 C2H2 ZF 13 35
M01435_2.00 C2H2 ZF 42 63

DNA Binding Domains

Protein ID Domain From To Sequence
RO3T_06968 C2H2 ZF 13 35
RO3T_06968 C2H2 ZF 42 63

Links

Other C2H2 ZF family TFs
Other Rhizopus oryzae TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATBZIP4 Arabidopsis lyrata fgenesh2_kg.2__488__AT1G59530.1 I
BZIP4 Arabidopsis thaliana AT1G59530 D
Bostr.10040s0294 Boechera stricta Bostr.10040s0294 I
Bra027855 Brassica rapa Bra027855 N
Cagra.1418s0004 Capsella grandiflora Cagra.1418s0004 I
Carubv10022186m.g Capsella rubella Carubv10022186m.g I