CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_00166
(
Verticillium albo atrum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
VDBG_00166
T078379_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_00166T0
C2H2 ZF
241
265
YRCPYDGCPKSFQQSTHLETHKRAH
VDBG_00166T0
C2H2 ZF
271
295
YKCEWHGCGRRFSQPGNLKTHTRLH
VDBG_00166T0
C2H2 ZF
301
323
FECEMCGACFAQRGNLTAHKATH
VDBG_00166T0
C2H2 ZF
329
354
FVCKLDTCNKCFTTRGNLKNHQNKYH
Links
Other
C2H2 ZF
family TFs
Other
Verticillium albo atrum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_00166
Verticillium alfalfae
VDBG_00166
N
0.827
VDAG_08452
Verticillium dahliae
VDAG_08452
N
0.827