AZF1 (Arabidopsis thaliana)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 AT5G67450 T080891_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AZF1
M01860_2.00		 Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163		 (Direct) (Direct)
AZF1
M06826_2.00		 Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.787 0.848
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.787 0.783
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.783 0.826
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.783 0.826
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.783 0.826
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.766 0.739
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.766 0.717
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01860_2.00 C2H2 ZF 51 73
M01860_2.00 C2H2 ZF 118 140

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G67450.1 C2H2 ZF 97 119
AT5G67450.1 C2H2 ZF 164 186

Links

Other C2H2 ZF family TFs
Other Arabidopsis thaliana TFs

160 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
FIBRA_08357 Fibroporia radiculosa FIBRA_08357 N 0.000
FOMPIDRAFT_1134751 Fomitopsis pinicola FOMPIDRAFT_1134751 N 0.000
GLOTRDRAFT_127510 Gloeophyllum trabeum GLOTRDRAFT_127510 N 0.000
fgenesh3_kg.3__397__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA Heterobasidion annosum fgenesh3_kg.3__397__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA N 0.000
fgenesh3_kg.27__1__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA Heterobasidion annosum fgenesh3_kg.27__1__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA N 0.000
fgenesh3_kg.15__30__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA Heterobasidion annosum fgenesh3_kg.15__30__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA N 0.000
fgenesh3_kg.15__10__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA Heterobasidion annosum fgenesh3_kg.15__10__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA N 0.000
HETIRDRAFT_144838 Heterobasidion irregulare HETIRDRAFT_144838 N 0.000
HETIRDRAFT_412619 Heterobasidion irregulare HETIRDRAFT_412619 N 0.000
HETIRDRAFT_440636 Heterobasidion irregulare HETIRDRAFT_440636 N 0.000
HYDPIDRAFT_42253 Hydnomerulius pinastri HYDPIDRAFT_42253 N 0.000
JAAARDRAFT_37116 Jaapia argillacea JAAARDRAFT_37116 N 0.000
K443DRAFT_682392 Laccaria amethystina K443DRAFT_682392 N 0.000
Moror_495 Moniliophthora roreri Moror_495 N 0.000
PAXRUDRAFT_567209 Paxillus rubicundulus PAXRUDRAFT_567209 N 0.000
PAXRUDRAFT_825895 Paxillus rubicundulus PAXRUDRAFT_825895 N 0.000
PHACADRAFT_259035 Phanerochaete carnosa PHACADRAFT_259035 N 0.000
PHLGIDRAFT_38235 Phlebiopsis gigantea PHLGIDRAFT_38235 N 0.000
PILCRDRAFT_823959 Piloderma croceum PILCRDRAFT_823959 N 0.000
PISMIDRAFT_679110 Pisolithus microcarpus PISMIDRAFT_679110 N 0.000
M404DRAFT_997965 Pisolithus tinctorius M404DRAFT_997965 N 0.000
POSPLDRAFT_101465 Postia placenta POSPLDRAFT_101465 N 0.000
SCLCIDRAFT_1208064 Scleroderma citrinum SCLCIDRAFT_1208064 N 0.000
SERLA73DRAFT_168168 Serpula lacrymans SERLA73DRAFT_168168 N 0.000
CY34DRAFT_26021 Suillus luteus CY34DRAFT_26021 N 0.000
CY34DRAFT_729847 Suillus luteus CY34DRAFT_729847 N 0.000