CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA035306
(
Oryza indica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
BGIOSGA035306
T081557_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA035306-PA
C2H2 ZF
108
130
SCSVCWRVYPTSRLLSIHISEAH
Links
Other
C2H2 ZF
family TFs
Other
Oryza indica
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00013p00046610
Amborella trichopoda
AMTR_s00013p00046610
N
0.788
GSMUA_Achr6G16600_001
Musa acuminata
GSMUA_Achr6G16600_001
N
0.800
OBART11G14300
Oryza barthii
OBART11G14300
N
0.827
ORGLA11G0122000
Oryza glaberrima
ORGLA11G0122000
N
0.827
OGLUM11G13870
Oryza glumaepatula
OGLUM11G13870
N
0.827
OLONG_002987
Oryza longistaminata
OLONG_002987
N
0.827
OMERI11G11960
Oryza meridionalis
OMERI11G11960
N
0.827
OS11G0498400
Oryza sativa
OS11G0498400
N
0.827
Solyc02g094170.2
Solanum lycopersicum
Solyc02g094170.2
N
0.827
PGSC0003DMG400020210
Solanum tuberosum
PGSC0003DMG400020210
N
0.827
Traes_3DS_4F293F5BA
Triticum aestivum
Traes_3DS_4F293F5BA
N
0.827
VIT_14s0068g01930
Vitis vinifera
VIT_14s0068g01930
N
0.827