Bo9g181170 (Brassica oleracea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Bo9g181170 T081800_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.827 0.935
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.820 0.913
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.820 0.913
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.820 0.913
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.798 0.804
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.787 0.826
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.787 0.826
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.775 0.696
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.775 0.674
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g181170.1 C2H2 ZF 87 109
Bo9g181170.1 C2H2 ZF 143 165

Links

Other C2H2 ZF family TFs
Other Brassica oleracea TFs

180 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI010029 Acyrthosiphon pisum ACYPI010029 I 0.000
AAEL008177 Aedes aegypti AAEL008177 I 0.000
Alligator_sinensis_CCG000030.1 Alligator sinensis Alligator_sinensis_CCG000030.1 I 0.000
ENSAPLG00000003636 Anas platyrhynchos ENSAPLG00000003636 I 0.000
AARA007034 Anopheles arabiensis AARA007034 I 0.000
AATE012597 Anopheles atroparvus AATE012597 I 0.000
ACHR000854 Anopheles christyi ACHR000854 I 0.000
ACOM023689 Anopheles coluzzii ACOM023689 I 0.000
ACUA020146 Anopheles culicifacies ACUA020146 I 0.000
ADIR003045 Anopheles dirus ADIR003045 I 0.000
AEPI004479 Anopheles epiroticus AEPI004479 I 0.000
AFAF017887 Anopheles farauti AFAF017887 I 0.000
AFUN000025 Anopheles funestus AFUN000025 I 0.000
AGAP001895 Anopheles gambiae AGAP001895 I 0.000
AMAM022796 Anopheles maculatus AMAM022796 I 0.000
AMEC007605 Anopheles melas AMEC007605 I 0.000
AMEM008208 Anopheles merus AMEM008208 I 0.000
AMIN000460 Anopheles minimus AMIN000460 I 0.000
AQUA007214 Anopheles quadriannulatus AQUA007214 I 0.000
ASIS005878 Anopheles sinensis ASIS005878 I 0.000
ASTEI08728 Anopheles stephensi ASTEI08728 I 0.000
Afo_R005099 Aptenodytes forsteri Afo_R005099 I 0.000
ENSAMXG00000005838 Astyanax mexicanus ENSAMXG00000005838 I 0.000
ENSAMXG00000008005 Astyanax mexicanus ENSAMXG00000008005 I 0.000
ENSAMXG00000009823 Astyanax mexicanus ENSAMXG00000009823 I 0.000
ENSAMXG00000020635 Astyanax mexicanus ENSAMXG00000020635 I 0.000
gw.77.244.1 Branchiostoma floridae gw.77.244.1 I 0.000
e_gw.283.81.1 Branchiostoma floridae e_gw.283.81.1 I 0.000
FBXL19 Callithrix jacchus ENSCJAG00000002985 I 0.000
KDM2B Callithrix jacchus ENSCJAG00000001555 I 0.000
Aan_R013926 Calypte anna Aan_R013926 I 0.000
Cflo_02982--XP_394324.2_APIME Camponotus floridanus Cflo_02982--XP_394324.2_APIME I 0.000
Cmyd_10001861 Chelonia mydas Cmyd_10001861 I 0.000
CpipJ_CPIJ008371 Culex pipiens CpipJ_CPIJ008371 I 0.000
CPIJ008371 Culex quinquefasciatus CPIJ008371 I 0.000
kdm2ba Danio rerio ENSDARG00000036593 D 0.000
FBXL19 Erinaceus europaeus ENSEEUG00000001272 I 0.000
ENSFALG00000012392 Ficedula albicollis ENSFALG00000012392 I 0.000
ENSGMOG00000011590 Gadus morhua ENSGMOG00000011590 I 0.000
ENSGALG00000013286 Gallus gallus ENSGALG00000013286 I 0.000
FBXL19 Gasterosteus aculeatus ENSGACG00000014763 I 0.000
kdm2aa Gasterosteus aculeatus ENSGACG00000016421 I 0.000
Gfo_R013488 Geospiza fortis Gfo_R013488 I 0.000
HHAL000649-PA Halyomorpha halys HHAL000649-PA I 0.000
Hsal_05571--XP_394324.2_APIME Harpegnathos saltator Hsal_05571--XP_394324.2_APIME I 0.000
HelroG180456 Helobdella robusta HelroG180456 I 0.000
KDM2B Homo sapiens ENSG00000089094 D 0.000
ENSLACG00000006471 Latimeria chalumnae ENSLACG00000006471 I 0.000
FBXL19 Microcebus murinus ENSMICG00000001566 I 0.000
ENSMODG00000009064 Monodelphis domestica ENSMODG00000009064 I 0.000
Ocbimv22016485m.g Octopus bimaculoides Ocbimv22016485m.g I 0.000
ENSONIG00000009273 Oreochromis niloticus ENSONIG00000009273 I 0.000
ENSONIG00000010829 Oreochromis niloticus ENSONIG00000010829 I 0.000
ENSONIG00000018158 Oreochromis niloticus ENSONIG00000018158 I 0.000
kdm2ab Oryzias latipes ENSORLG00000003398 I 0.000
ENSPSIG00000002317 Pelodiscus sinensis ENSPSIG00000002317 I 0.000
PPAI007950 Phlebotomus papatasi PPAI007950 I 0.000
ENSSHAG00000011039 Sarcophilus harrisii ENSSHAG00000011039 I 0.000
KDM2A Taeniopygia guttata ENSTGUG00000005980 I 0.000
kdm2ab Takifugu rubripes ENSTRUG00000013920 N 0.000
kdm2ba Takifugu rubripes ENSTRUG00000005276 I 0.000
FBXL19 Takifugu rubripes ENSTRUG00000000468 I 0.000
FBXL19 Tetraodon nigroviridis ENSTNIG00000006493 D 0.000
kdm2aa Tetraodon nigroviridis ENSTNIG00000003239 I 0.000
fbxl19.S Xenopus laevis XB-GENE-994856 I 0.000
fbxl19 Xenopus tropicalis XB-GENE-994853 I 0.000
ENSXMAG00000018857 Xiphophorus maculatus ENSXMAG00000018857 I 0.000