CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI2G37790
(
Brachypodium distachyon
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
BRADI2G37790
T082004_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI2G37790.1
C2H2 ZF
30
53
YKCEFCDVVRSKKQLIRAHVLEHH
BRADI2G37790.1
C2H2 ZF
77
99
HDCEECGARFKKPAHLKQHMQSH
BRADI2G37790.1
C2H2 ZF
105
129
FACHVDGCPFSYSRKDHLNRHLLTH
BRADI2G37790.1
C2H2 ZF
134
159
FICPMEGCNRKFSTRGNMQRHVQEMH
BRADI2G37790.1
C2H2 ZF
171
195
FICPEVNCGKAFKFASKLQKHEDSH
BRADI2G37790.1
C2H2 ZF
261
286
VKCHFEDCKCSFSKKSNLDKHIKAVH
BRADI2G37790.1
C2H2 ZF
292
318
YACGFAGCGKKFSYKHVRDNHEKSSAH
BRADI2G37790.2
C2H2 ZF
6
30
FACHVDGCPFSYSRKDHLNRHLLTH
BRADI2G37790.2
C2H2 ZF
35
60
FICPMEGCNRKFSTRGNMQRHVQEMH
BRADI2G37790.2
C2H2 ZF
72
96
FICPEVNCGKAFKFASKLQKHEDSH
BRADI2G37790.2
C2H2 ZF
162
187
VKCHFEDCKCSFSKKSNLDKHIKAVH
BRADI2G37790.2
C2H2 ZF
193
219
YACGFAGCGKKFSYKHVRDNHEKSSAH
Links
Other
C2H2 ZF
family TFs
Other
Brachypodium distachyon
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART05G01510
Oryza barthii
OBART05G01510
N
0.771
OGLUM05G01550
Oryza glumaepatula
OGLUM05G01550
N
0.771
BGIOSGA019080
Oryza indica
BGIOSGA019080
N
0.771
ONIVA05G01580
Oryza nivara
ONIVA05G01580
N
0.771
OPUNC05G01460
Oryza punctata
OPUNC05G01460
N
0.771
ORUFI05G01600
Oryza rufipogon
ORUFI05G01600
N
0.771
TRIUR3_16972
Triticum urartu
TRIUR3_16972
N
0.776