CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG14489
(
Caenorhabditis briggsae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CBG14489
T082928_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ham-2
M00612_2.00
Caenorhabditis elegans
NNGCTWNNN
NNNWAGCNN
PBM
Narasimhan et al.(2015)
pTH9149
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG14489
C2H2 ZF
16
39
FPCSICQKVFCHSSSLSRHRMQAH
CBG14489
C2H2 ZF
43
66
YTCTTCNNEIPSNDTLRSHMYRVH
CBG14489
C2H2 ZF
72
93
FMCRCCNWAFPDKTSLHIHMQS
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis briggsae
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DDB_G0282499
Dictyostelium discoideum
DDB_G0282499
N