CBN29794 (Caenorhabditis brenneri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBN29794 T083085_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FEZF1
M08307_2.00 		Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN		 ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE 		0.770 0.848
FEZF1
M08889_2.00 		Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH		 Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C 		0.770 0.848
erm
M03686_2.00 		Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA		 SELEX
Nitta et al.(2015)
CG31670_1 		0.768 0.826
erm
M06128_2.00 		Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM		 B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375 		0.768 0.826
erm
M06129_2.00 		Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV		 B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375 		0.768 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN29794 C2H2 ZF 47 69
CBN29794 C2H2 ZF 75 97
CBN29794 C2H2 ZF 103 125
CBN29794 C2H2 ZF 131 153
CBN29794 C2H2 ZF 159 181
CBN29794 C2H2 ZF 187 210

Links

Other C2H2 ZF family TFs
Other Caenorhabditis brenneri TFs

141 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSBTAP00000050946-D1 Bos grunniens ENSBTAP00000050946-D1 I 0.000
MTERF1 Bos taurus ENSBTAG00000045617 I 0.000
MTERF1 Callithrix jacchus ENSCJAG00000014169 I 0.000
MTERF1 Canis familiaris ENSCAFG00000001908 I 0.000
MTERF1 Cavia porcellus ENSCPOG00000003510 I 0.000
ENSCSAG00000012508 Chlorocebus sabaeus ENSCSAG00000012508 I 0.000
MTERF1 Erinaceus europaeus ENSEEUG00000013448 I 0.000
MTERF1 Felis catus ENSFCAG00000030885 I 0.000
MTERF1 Gorilla gorilla ENSGGOG00000025995 I 0.000
MTERF1 Homo sapiens ENSG00000127989 D 0.000
ENSSTOG00000001846 Ictidomys tridecemlineatus ENSSTOG00000001846 I 0.000
MTERF1 Loxodonta africana ENSLAFG00000000054 I 0.000
ENSP00000248643 Macaca fascicularis ENSP00000248643 I 0.000
MTERF1 Macaca mulatta ENSMMUG00000015516 I 0.000
ENSMPUG00000008568 Mustela putorius furo ENSMPUG00000008568 I 0.000
Mterf1a Mus musculus ENSMUSG00000040429 I 0.000
Mterf1b Mus musculus ENSMUSG00000053178 I 0.000
Myotis_brandtii_MTERF_10033812 Myotis brandtii Myotis_brandtii_MTERF_10033812 I 0.000
MTERF1 Myotis lucifugus ENSMLUG00000011330 I 0.000
ENSNLEG00000015192 Nomascus leucogenys ENSNLEG00000015192 I 0.000
MTERF1 Oryctolagus cuniculus ENSOCUG00000010902 I 0.000
MTERF1 Otolemur garnettii ENSOGAG00000001378 I 0.000
ENSOARG00000016682 Ovis aries ENSOARG00000016682 I 0.000
MTERF1 Pan troglodytes ENSPTRG00000019388 I 0.000
ENSPANG00000007445 Papio anubis ENSPANG00000007445 I 0.000
ENSPPYG00000017826 Pongo abelii ENSPPYG00000017826 I 0.000
Mterf1 Rattus norvegicus ENSRNOG00000007899 I 0.000
MTERF1 Sus scrofa ENSSSCG00000015309 I 0.000
MTERF1 Tupaia belangeri ENSTBEG00000005760 I 0.000
MTERF1 Tursiops truncatus ENSTTRG00000010321 I 0.000
MTERF1 Vicugna pacos ENSVPAG00000005202 I 0.000